RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 EMC7Q9NPA0 242 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 EQTNQ9NQ60 294 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 HPF1Q9NWY4 346 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 TEX10Q9NXF1 929 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 CFAP20Q9Y6A4 193 aaKnown RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 A0A0A6YYJ9 748 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 TRBV4-1A0A0J9YWV2 114 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 GABRR3A8MPY1 467 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 GMDSO60547 372 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 RAB3BP20337 219 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 CSRP3P50461 194 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 KCNJ10P78508 379 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 ZNF763Q0D2J5 394 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 MTAPQ13126 283 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 PIN1Q13526 163 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 IRF3Q14653 427 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 GPR33Q49SQ1 333 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 RPS26P11Q5JNZ5 115 aaPredicted RBP11.3□□□□□ -0.6
ERCC1-202ENST00000300853 PGBD2Q6P3X8 592 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 C17orf107Q6ZR85 190 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 ADGRF3Q8IZF5 1079 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 YIPF4Q9BSR8 244 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 TMEM43Q9BTV4 400 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 C1QTNF7Q9BXJ2 289 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 ACTR6Q9GZN1 396 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 OR51I1Q9H343 314 aa11.3□□□□□ -0.6
ERCC1-202ENST00000300853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TAPBPO15533 448 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 IGFBP1P08833 259 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 JUPP14923 745 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 GSTM3P21266 225 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SOX9P48436 509 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 STK19P49842 368 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 AFF1P51825 1210 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 EPHA5P54756 1037 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 AP1S2P56377 157 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 DOC2AQ14183 400 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TRAPPC5Q8IUR0 188 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 RAD9AQ99638 391 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SLITRK2Q9H156 845 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TRIM36Q9NQ86 728 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 GTF2A1LQ9UNN4 478 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 J3QLW9 94 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 GNB5O14775 395 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 MT-ND4P03905 459 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 ZNF19P17023 458 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CTRB1P17538 263 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 FAUP35544 74 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CLCN7P51798 805 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 RGS8P57771 180 aaPredicted RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SLBPQ14493 270 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CTRB2Q6GPI1 263 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 PYHIN1Q6K0P9 492 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 NXPE1Q8N323 547 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TRMT10AQ8TBZ6 339 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 PKMYT1Q99640 499 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 BARHL1Q9BZE3 327 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 IMP3Q9NV31 184 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SCML2Q9UQR0 700 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TMEM5Q9Y2B1 443 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SPDEFO95238 335 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TCRBP04435 133 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TIA1P31483 386 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 GKP32189 559 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 VIPR1P32241 457 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CAMK1Q14012 370 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TPGS1Q6ZTW0 290 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 C3orf58Q8NDZ4 430 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 UPRTQ96BW1 309 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 P2RY13Q9BPV8 354 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 TTTY10Q9BZA0 68 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 NDUFB11Q9NX14 153 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 RASD1Q9Y272 281 aa11.29□□□□□ -0.6
ERCC1-202ENST00000300853 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms