RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PIN1Q13526 163 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 SPANXN2Q5MJ10 180 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TMEM201Q5SNT2 666 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 C6orf183Q5T699 404 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CASP12Q6UXS9 341 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 UBE3DQ7Z6J8 389 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CCDC190Q86UF4 302 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 COMTD1Q86VU5 262 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 SLC34A3Q8N130 599 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 RGMAQ96B86 450 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 SLC6A18Q96N87 628 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 QRFPRQ96P65 431 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CTRCQ99895 268 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TMEM245Q9H330 911 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 OR51I1Q9H343 314 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 EXOSC4Q9NPD3 245 aaKnown RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 ACAD8Q9UKU7 415 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 M0R3H8 397 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 PPM1DO15297 605 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 LCMT2O60294 686 aaKnown RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 RPN2P04844 631 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 SERPIND1P05546 499 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CD72P21854 359 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 ETV6P41212 452 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 NKX2-5P52952 324 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CDK3Q00526 305 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 METRNLQ641Q3 311 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 DESI1Q6ICB0 168 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 ADAMTSL4Q6UY14 1074 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 OLIG3Q7RTU3 272 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TCEANCQ8N8B7 351 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 XAGE5Q8WWM1 108 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 RASSF5Q8WWW0 418 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 OTUB1Q96FW1 271 aaPredicted RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 TEFMQ96QE5 360 aaKnown RBP13.61□□□□□ -0.23
HIF3A-202ENST00000244303 FUZQ9BT04 418 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 CNPPD1Q9BV87 410 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 A4GNTQ9UNA3 340 aa13.61□□□□□ -0.23
HIF3A-202ENST00000244303 PNMA8CA0A1B0GUJ8 204 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 KMOO15229 486 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TPST2O60704 377 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 SNRNP200O75643 2136 aaKnown RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 UGT2B17O75795 530 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TP53P04637 393 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 LBX1P52954 281 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 ZNF91Q05481 1191 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 MEDAGQ5VYS4 303 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 IQCF1Q8N6M8 205 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 LINC01555Q8NAE3 123 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TXNDC15Q96J42 360 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 SLC35G5Q96KT7 338 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TRPC4Q9UBN4 977 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TBC1D3BA6NDS4 549 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 WASHC1A8K0Z3 465 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 DDX5P17844 614 aaKnown RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TNNI3P19429 210 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TCEA1P23193 301 aaKnown RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 PTGER1P34995 402 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 HSD17B2P37059 387 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 CLCNKAP51800 687 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 NCF4Q15080 339 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 SPHARQ15513 63 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 NDUFA5Q16718 116 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 WASH2PQ6VEQ5 465 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 ADCK2Q7Z695 626 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 HMGN2P46Q86SG4 172 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 OR8J1Q8NGP2 316 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 DPH7Q9BTV6 452 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 TSSK6Q9BXA6 273 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 ASPNQ9BXN1 380 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 PCBD2Q9H0N5 130 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 GLIPR2Q9H4G4 154 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 KCNK12Q9HB15 430 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 ACSS1Q9NUB1 689 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 KLHL3Q9UH77 587 aa13.6□□□□□ -0.23
HIF3A-202ENST00000244303 RPL36Q9Y3U8 105 aaKnown RBP13.6□□□□□ -0.23
HIF3A-202ENST00000244303 IGLON5A6NGN9 336 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 NME6O75414 186 aaPredicted RBP13.59□□□□□ -0.23
HIF3A-202ENST00000244303 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
HIF3A-202ENST00000244303 HBQ1P09105 142 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 NR2F1P10589 423 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 GPC1P35052 558 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 RPS19P39019 145 aaKnown RBP13.59□□□□□ -0.23
HIF3A-202ENST00000244303 DUSP6Q16828 381 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 FAM46CQ5VWP2 391 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 OR4C11Q6IEV9 310 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 PODNL1Q6PEZ8 512 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 PAQR6Q6TCH4 344 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 GET4Q7L5D6 327 aaPredicted RBP13.59□□□□□ -0.23
HIF3A-202ENST00000244303 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
HIF3A-202ENST00000244303 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms