RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SLC13A3Q8WWT9 602 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 FGF14Q92915 247 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 FAM126AQ9BYI3 521 aaPredicted RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 GPR63Q9BZJ6 419 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 THUMPD1Q9NXG2 353 aaKnown RBP18.89■□□□□ 0.61
HOXC13-201ENST00000243056 SLC6A14Q9UN76 642 aa18.89■□□□□ 0.61
HOXC13-201ENST00000243056 KPNA5O15131 536 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 PSIP1O75475 530 aaKnown RBP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 PRAMEF1O95521 474 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 FCARP24071 287 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 SEMG2Q02383 582 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 LRRC32Q14392 662 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 BCL2L15Q5TBC7 163 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 PARM1Q6UWI2 310 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 CREB3L1Q96BA8 519 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 FOLH1BQ9HBA9 442 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 HEBP1Q9NRV9 189 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 C1orf109Q9NX04 203 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 MS4A12Q9NXJ0 267 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 POLR3HQ9Y535 204 aaPredicted RBP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 ANXA3P12429 323 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 HLA-EP13747 358 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 SELLP14151 372 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 GEMP55040 296 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 INO80DQ53TQ3 878 aaPredicted RBP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 RUNDC3AQ59EK9 446 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 SIRPB2Q5JXA9 342 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 DGKKQ5KSL6 1271 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 ZNF549Q6P9A3 640 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 GPR155Q7Z3F1 870 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 LMLNQ96KR4 655 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 HBEGFQ99075 208 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 CDCA3Q99618 268 aaPredicted RBP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 MGME1Q9BQP7 344 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 CDCA4Q9BXL8 241 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 S1PR5Q9H228 398 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 TSR3Q9UJK0 312 aaKnown RBP18.88■□□□□ 0.61
HOXC13-201ENST00000243056 PADI2Q9Y2J8 665 aa18.88■□□□□ 0.61
HOXC13-201ENST00000243056 F5P12259 2224 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 FAM220BPB1ANY3 271 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 TEX46H3BTG2 121 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 OR1I1O60431 355 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 GZMMP51124 257 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 DMC1Q14565 340 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 DDI2Q5TDH0 399 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 RGS7BPQ6MZT1 257 aaPredicted RBP18.87■□□□□ 0.61
HOXC13-201ENST00000243056 VITQ6UXI7 678 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 OR4F6Q8NGB9 312 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 GPR150Q8NGU9 434 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 C9orf43Q8TAL5 461 aaPredicted RBP18.87■□□□□ 0.61
HOXC13-201ENST00000243056 ATOH8Q96SQ7 321 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 DPH7Q9BTV6 452 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 NUSAP1Q9BXS6 441 aaKnown RBP18.87■□□□□ 0.61
HOXC13-201ENST00000243056 PPP1R3EQ9H7J1 279 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 LHX3Q9UBR4 397 aa18.87■□□□□ 0.61
HOXC13-201ENST00000243056 TUBAL3A6NHL2 446 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 ZNF821O75541 412 aaPredicted RBP18.86■□□□□ 0.61
HOXC13-201ENST00000243056 RHOBTB1O94844 696 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 SCG5P05408 212 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 FABP1P07148 127 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 SYPP08247 313 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 RPS17P08708 135 aaKnown RBP18.86■□□□□ 0.61
HOXC13-201ENST00000243056 RHOAP61586 193 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 ZNF628Q5EBL2 1059 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 KANSL1Q7Z3B3 1105 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 CCDC117Q8IWD4 279 aaPredicted RBP18.86■□□□□ 0.61
HOXC13-201ENST00000243056 TMEM132CQ8N3T6 1108 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 DCAF4L2Q8NA75 395 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 KIAA1191Q96A73 305 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 NXPE2Q96DL1 559 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 COQ10AQ96MF6 247 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 DZANK1Q9NVP4 752 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 TMEM45AQ9NWC5 275 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 HCN3Q9P1Z3 774 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 MGAT4BQ9UQ53 548 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 DTX4Q9Y2E6 619 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 ATG2BQ96BY7 2078 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 UROSP10746 265 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 GDI2P50395 445 aaKnown RBP18.86■□□□□ 0.61
HOXC13-201ENST00000243056 NHLRC3Q5JS37 347 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 VTCN1Q7Z7D3 282 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 CALHM3Q86XJ0 350 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 TMEM43Q9BTV4 400 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 PTTG3PQ9NZH4 202 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 CTSFQ9UBX1 484 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 PPIEQ9UNP9 301 aaKnown RBP18.86■□□□□ 0.61
HOXC13-201ENST00000243056 PCDHGB7Q9Y5F8 929 aa18.86■□□□□ 0.61
HOXC13-201ENST00000243056 HYKKA2RU49 373 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 SIGLEC5O15389 551 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 SIGLEC6O43699 453 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 SELENOFO60613 162 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 ATXN1LP0C7T5 689 aaKnown RBP18.85■□□□□ 0.61
HOXC13-201ENST00000243056 CR2P20023 1033 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 ITGB7P26010 798 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 SIGLEC14Q08ET2 396 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 SF3A2Q15428 464 aaKnown RBP18.85■□□□□ 0.61
HOXC13-201ENST00000243056 TMEM184AQ6ZMB5 413 aa18.85■□□□□ 0.61
HOXC13-201ENST00000243056 ADIPOR2Q86V24 386 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms