RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 VANGL1Q8TAA9 524 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TRNT1Q96Q11 434 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SARGQ9BW04 601 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 C6orf62Q9GZU0 229 aaPredicted RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 ZCCHC3Q9NUD5 404 aaKnown RBP20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 TRPC4Q9UBN4 977 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 SNX11Q9Y5W9 270 aa20.78■□□□□ 0.92
SMARCD2-201ENST00000225742 IGKV1-8A0A0C4DH67 115 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 PNMA8CA0A1B0GUJ8 204 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 FAM227AF5H4B4 570 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 CASC3O15234 703 aaKnown RBP20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 KDM1AO60341 852 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 SCG5P05408 212 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 ENDOUP21128 410 aaKnown RBP20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 NCBP2P52298 156 aaKnown RBP eCLIP20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 HDDC3Q8N4P3 179 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 AMER3Q8N944 861 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 SRFBP1Q8NEF9 429 aaKnown RBP20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 OR56A1Q8NGH5 318 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 OR4D11Q8NGI4 311 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 XAGE5Q8WWM1 108 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 OR5M11Q96RB7 305 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 C17orf62Q9BQA9 187 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 CENPOQ9BU64 300 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 FNDC11Q9BVV2 318 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 MRPS30Q9NP92 439 aaKnown RBP20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 OR1A2Q9Y585 309 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 C2orf16Q68DN1 1984 aa20.77■□□□□ 0.92
SMARCD2-201ENST00000225742 A0A0G2JPF8 293 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 PRAMEF27A3QJZ7 478 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 PRR19A6NJB7 356 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 HNRNPCL2B2RXH8 293 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 HNRNPCL3B7ZW38 293 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 H3BN98 237 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MED26O95402 600 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 APODP05090 189 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SERPIND1P05546 499 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 HNRNPCL4P0DMR1 293 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 TSFMP43897 325 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 KRR1Q13601 381 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 DUSP6Q16828 381 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 LEXMQ3ZCV2 418 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MFSD4BQ5TF39 518 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 PPP2R2DQ66LE6 453 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MRM1Q6IN84 353 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 VITQ6UXI7 678 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 ZNF793Q6ZN11 406 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SLC22A16Q86VW1 577 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 LYSMD2Q8IV50 215 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SUN3Q8TAQ9 357 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 IL4I1Q96RQ9 567 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 AICDAQ9GZX7 198 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 BTBD1Q9H0C5 482 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 LSM2Q9Y333 95 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 ASB4Q9Y574 426 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 A0A075B6Q4 140 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 ARHGAP33O14559 1287 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 ZSCAN9O15535 394 aaPredicted RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 NME6O75414 186 aaPredicted RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SNX4O95219 450 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 GSTM3P21266 225 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 BCL6P41182 706 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 CBX3Q13185 183 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 KRT33BQ14525 404 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 TANGO2Q6ICL3 276 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 RBM45Q8IUH3 476 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 FAM26EQ8N5C1 309 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SLC7A13Q8TCU3 470 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MS4A6EQ96DS6 147 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MND1Q9BWT6 205 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 C1QTNF2Q9BXJ5 285 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 PINK1Q9BXM7 581 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 POLDIP3Q9BY77 421 aaKnown RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 OSGEPL1Q9H4B0 414 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 CRNNQ9UBG3 495 aaPredicted RBP20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 SLC17A4Q9Y2C5 497 aa20.76■□□□□ 0.91
SMARCD2-201ENST00000225742 MYO7AQ13402 2215 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 NUMA1Q14980 2115 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 HEATR5BQ9P2D3 2071 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 PRICKLE3O43900 615 aaPredicted RBP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 KIAA0513O60268 411 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 LGI1O95970 557 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 HIST1H1TP22492 207 aaPredicted RBP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 RPS21P63220 83 aaKnown RBP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 TARDBPQ13148 414 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 SLAMF1Q13291 335 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 ABHD17CQ6PCB6 329 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 PODNL1Q6PEZ8 512 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 GET4Q7L5D6 327 aaPredicted RBP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 SNX29P2Q8IUI4 249 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 PRRC1Q96M27 445 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 OPALINQ96PE5 141 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 PRDM7Q9NQW5 492 aa20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 IMP3Q9NV31 184 aaKnown RBP20.75■□□□□ 0.91
SMARCD2-201ENST00000225742 FHP07954 510 aa20.74■□□□□ 0.91
SMARCD2-201ENST00000225742 ADRA2AP08913 450 aa20.74■□□□□ 0.91
SMARCD2-201ENST00000225742 SGCGQ13326 291 aa20.74■□□□□ 0.91
SMARCD2-201ENST00000225742 INAVAQ3KP66 663 aa20.74■□□□□ 0.91
SMARCD2-201ENST00000225742 YAF2Q8IY57 180 aa20.74■□□□□ 0.91
SMARCD2-201ENST00000225742 PROKR2Q8NFJ6 384 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms