RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SHC2P98077 582 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 GRIK2Q13002 908 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 NKPD1Q17RQ9 610 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 CHRFAM7AQ494W8 412 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 PIGGQ5H8A4 983 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 NRROSQ86YC3 692 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TMEM25Q86YD3 366 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 LAS2Q8IYD9 372 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 NRG4Q8WWG1 115 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 EPYCQ99645 322 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TMEM246Q9BRR3 403 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TAS2R9Q9NYW1 312 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 METTL21EPA6NDL7 271 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 RNGTTO60942 597 aaKnown RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 PPP1R3DO95685 299 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC2A5P22732 501 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 PON2Q15165 354 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 LETMD1Q6P1Q0 360 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SPAG16Q8N0X2 631 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SUN3Q8TAQ9 357 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SMARCD2Q92925 531 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 ZUFSPQ96AP4 578 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 LGALS12Q96DT0 336 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 FEVQ99581 238 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 FTSJ1Q9UET6 329 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 DHDHQ9UQ10 334 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TMEM5Q9Y2B1 443 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 A0A096LPI6 279 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 RP2O75695 350 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 HAGHLQ6PII5 290 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 NAGSQ8N159 534 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 CREB3L4Q8TEY5 395 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 MICU1Q9BPX6 476 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 HCFC1R1Q9NWW0 138 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 RPH3AQ9Y2J0 694 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 MON2Q7Z3U7 1717 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TVP23AA6NH52 213 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 ZNF30P17039 623 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SIX1Q15475 284 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 LEG1Q6P5S2 330 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 C12orf42Q96LP6 360 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 PRDM9Q9NQV7 894 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 KCNN3Q9UGI6 736 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 PTBP2Q9UKA9 531 aaKnown RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 DLGAP1O14490 977 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 NCR1O76036 304 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 STC2O76061 302 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 TIA1P31483 386 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■□□□ 13.1
TGFBR3-201ENST00000212355 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 ASPGQ86U10 573 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 KCNJ9Q92806 393 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 MAELQ96JY0 434 aaKnown RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
TGFBR3-201ENST00000212355 IGSF5Q9NSI5 407 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 HCSTQ9UBK5 93 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 SPO11Q9Y5K1 396 aa13□□□□□ -0.33
TGFBR3-201ENST00000212355 NME4O00746 187 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 VMACQ2NL98 169 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 ALG10Q5BKT4 473 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 BCL2L15Q5TBC7 163 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 ERN2Q76MJ5 926 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 GALNT6Q8NCL4 622 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 OR2T33Q8NG76 320 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC25A18Q9H1K4 315 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 CCM2LQ9NUG4 571 aaPredicted RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 NLKQ9UBE8 527 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 EPHA6Q9UF33 1036 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 A0A1W2PQU0 124 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 SCAMP2O15127 329 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 PMM2O15305 246 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 ARL6IP5O75915 188 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 POU3F4P49335 361 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 PER3P56645 1201 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 NPRL3Q12980 569 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC27A4Q6P1M0 643 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 PAMR1Q6UXH9 720 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 USP36Q9P275 1121 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 KCPQ6ZWJ8 1503 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 NPIPA2E9PIF3 369 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 NPIPA3F8WFD2 350 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 SLC1A7O00341 560 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 EEDO75530 441 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 TMEM175Q9BSA9 504 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 USP22Q9UPT9 525 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 PCDHGB1Q9Y5G3 927 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 CNR2P34972 360 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 MECP2P51608 486 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 DPH1Q9BZG8 443 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 AIG1Q9NVV5 245 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 EXOSC1Q9Y3B2 195 aaKnown RBP12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 PCDHGB5Q9Y5G0 923 aa12.99□□□□□ -0.33
TGFBR3-201ENST00000212355 F2P00734 622 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms