RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 METTL22Q9BUU2 404 aaPredicted RBP21.88■■□□□ 1.09
PHGDH-226ENST00000641756 GLI3P10071 1580 aa21.87■■□□□ 1.09
PHGDH-226ENST00000641756 DDIT3P35638 169 aa21.87■■□□□ 1.09
PHGDH-226ENST00000641756 ANKRD13DQ6ZTN6 518 aa21.87■■□□□ 1.09
PHGDH-226ENST00000641756 PI4K2BQ8TCG2 481 aa21.87■■□□□ 1.09
PHGDH-226ENST00000641756 HSP90AA1P07900 732 aaKnown RBP21.86■■□□□ 1.09
PHGDH-226ENST00000641756 GSE1Q14687 1217 aa21.86■■□□□ 1.09
PHGDH-226ENST00000641756 GCKRQ14397 625 aa21.85■■□□□ 1.09
PHGDH-226ENST00000641756 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
PHGDH-226ENST00000641756 LAMB4A4D0S4 1761 aa21.83■■□□□ 1.09
PHGDH-226ENST00000641756 SHANK3Q9BYB0 1731 aa21.83■■□□□ 1.09
PHGDH-226ENST00000641756 ERVV-2B6SEH9 535 aa21.83■■□□□ 1.08
PHGDH-226ENST00000641756 CLASRPQ8N2M8 674 aaKnown RBP21.83■■□□□ 1.08
PHGDH-226ENST00000641756 NKX1-1Q15270 411 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-226ENST00000641756 ANO2Q9NQ90 1003 aa21.82■■□□□ 1.08
PHGDH-226ENST00000641756 EPHA10Q5JZY3 1008 aa21.82■■□□□ 1.08
PHGDH-226ENST00000641756 IL25Q9H293 177 aa21.82■■□□□ 1.08
PHGDH-226ENST00000641756 AK9Q5TCS8 1911 aa21.81■■□□□ 1.08
PHGDH-226ENST00000641756 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
PHGDH-226ENST00000641756 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
PHGDH-226ENST00000641756 ERC1Q8IUD2 1116 aa21.81■■□□□ 1.08
PHGDH-226ENST00000641756 NBPF26B4DH59 902 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 NBPF14Q5TI25 921 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 NBPF10Q6P3W6 841 aaKnown RBP21.8■■□□□ 1.08
PHGDH-226ENST00000641756 NBPF15Q8N660 670 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 SIL1Q9H173 461 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.8■■□□□ 1.08
PHGDH-226ENST00000641756 ARFGEF2Q9Y6D5 1785 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 MCM4P33991 863 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 KLHDC4Q8TBB5 520 aa21.8■■□□□ 1.08
PHGDH-226ENST00000641756 AFDNP55196 1824 aaKnown RBP21.8■■□□□ 1.08
PHGDH-226ENST00000641756 G3BP1Q13283 466 aaKnown RBP eCLIP21.79■■□□□ 1.081e-6■■■□□ 18.8
PHGDH-226ENST00000641756 BTG4Q9NY30 223 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 USP42Q9H9J4 1324 aaKnown RBP21.79■■□□□ 1.08
PHGDH-226ENST00000641756 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 KCPQ6ZWJ8 1503 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 SASH1O94885 1247 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 IFIT2P09913 472 aaKnown RBP21.79■■□□□ 1.08
PHGDH-226ENST00000641756 AACSQ86V21 672 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 CNTROBQ8N137 903 aa21.79■■□□□ 1.08
PHGDH-226ENST00000641756 TTC41PQ6P2S7 1318 aa21.78■■□□□ 1.08
PHGDH-226ENST00000641756 ST18O60284 1047 aa21.78■■□□□ 1.08
PHGDH-226ENST00000641756 A1BGP04217 495 aa21.78■■□□□ 1.08
PHGDH-226ENST00000641756 PLBD2Q8NHP8 589 aa21.78■■□□□ 1.08
PHGDH-226ENST00000641756 PALD1Q9ULE6 856 aa21.78■■□□□ 1.08
PHGDH-226ENST00000641756 CIZ1Q9ULV3 898 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-226ENST00000641756 UBE3BQ7Z3V4 1068 aa21.77■■□□□ 1.08
PHGDH-226ENST00000641756 GLRX3O76003 335 aaKnown RBP21.77■■□□□ 1.08
PHGDH-226ENST00000641756 PAPPAQ13219 1627 aa21.76■■□□□ 1.07
PHGDH-226ENST00000641756 MCCP23508 829 aa21.76■■□□□ 1.07
PHGDH-226ENST00000641756 TTLL7Q6ZT98 887 aa21.76■■□□□ 1.07
PHGDH-226ENST00000641756 ECHDC1Q9NTX5 307 aa21.76■■□□□ 1.07
PHGDH-226ENST00000641756 TOGARAM1Q9Y4F4 1720 aa21.76■■□□□ 1.07
PHGDH-226ENST00000641756 TNPO1Q92973 898 aaKnown RBP21.76■■□□□ 1.07
PHGDH-226ENST00000641756 A0A087WZG4 1122 aa21.75■■□□□ 1.07
PHGDH-226ENST00000641756 EAF2Q96CJ1 260 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-226ENST00000641756 CCDC8Q9H0W5 538 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-226ENST00000641756 ERBB4Q15303 1308 aa21.75■■□□□ 1.07
PHGDH-226ENST00000641756 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
PHGDH-226ENST00000641756 GPATCH3Q96I76 525 aa21.74■■□□□ 1.07
PHGDH-226ENST00000641756 NEK4P51957 841 aa21.73■■□□□ 1.07
PHGDH-226ENST00000641756 TLR7Q9NYK1 1049 aaKnown RBP21.73■■□□□ 1.07
PHGDH-226ENST00000641756 TMOD3Q9NYL9 352 aa21.73■■□□□ 1.07
PHGDH-226ENST00000641756 SGSM2O43147 1006 aa21.73■■□□□ 1.07
PHGDH-226ENST00000641756 TNS2Q63HR2 1409 aa21.73■■□□□ 1.07
PHGDH-226ENST00000641756 CWC27Q6UX04 472 aaKnown RBP21.73■■□□□ 1.07
PHGDH-226ENST00000641756 ZBTB3Q9H5J0 574 aa21.71■■□□□ 1.07
PHGDH-226ENST00000641756 ROBO1Q9Y6N7 1651 aa21.71■■□□□ 1.07
PHGDH-226ENST00000641756 RFX5P48382 616 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-226ENST00000641756 CASP7P55210 303 aa21.7■■□□□ 1.06
PHGDH-226ENST00000641756 SSFA2P28290 1259 aa21.7■■□□□ 1.06
PHGDH-226ENST00000641756 ANAPC15P60006 121 aa21.7■■□□□ 1.06
PHGDH-226ENST00000641756 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
PHGDH-226ENST00000641756 NUP188Q5SRE5 1749 aa21.69■■□□□ 1.06
PHGDH-226ENST00000641756 PTPN12Q05209 780 aaKnown RBP21.69■■□□□ 1.06
PHGDH-226ENST00000641756 COPRSQ9NQ92 184 aa21.69■■□□□ 1.06
PHGDH-226ENST00000641756 DIAPH3Q9NSV4 1193 aa21.69■■□□□ 1.06
PHGDH-226ENST00000641756 ASAP1Q9ULH1 1129 aa21.69■■□□□ 1.06
PHGDH-226ENST00000641756 HSPA4P34932 840 aa21.68■■□□□ 1.06
PHGDH-226ENST00000641756 PIGBQ92521 554 aa21.68■■□□□ 1.06
PHGDH-226ENST00000641756 ZGPATQ8N5A5 531 aaKnown RBP21.68■■□□□ 1.06
PHGDH-226ENST00000641756 LSG1Q9H089 658 aaKnown RBP21.68■■□□□ 1.06
PHGDH-226ENST00000641756 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-226ENST00000641756 RAD50Q92878 1312 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 CWC25Q9NXE8 425 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-226ENST00000641756 COL15A1P39059 1388 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 COL14A1Q05707 1796 aaKnown RBP21.67■■□□□ 1.06
PHGDH-226ENST00000641756 DDX11L8A8MPP1 907 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 H7C1W4 665 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 LMBR1LQ6UX01 489 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 NOL8Q76FK4 1167 aaKnown RBP21.67■■□□□ 1.06
PHGDH-226ENST00000641756 EVI5LQ96CN4 794 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
PHGDH-226ENST00000641756 CHMP3Q9Y3E7 222 aa21.67■■□□□ 1.06
PHGDH-226ENST00000641756 TFCP2Q12800 502 aa21.66■■□□□ 1.06
PHGDH-226ENST00000641756 GBP4Q96PP9 640 aa21.66■■□□□ 1.06
PHGDH-226ENST00000641756 BOLA2Q9H3K6 86 aa21.66■■□□□ 1.06
PHGDH-226ENST00000641756 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
PHGDH-226ENST00000641756 TRAK2O60296 914 aa21.65■■□□□ 1.06
PHGDH-226ENST00000641756 KIAA1211Q6ZU35 1233 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms