RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 JCADQ9P266 1359 aa26.84■■□□□ 1.89
CHRNA7-228ENST00000637519 SURF6O75683 361 aaKnown RBP26.83■■□□□ 1.89
CHRNA7-228ENST00000637519 THRAP3Q9Y2W1 955 aaKnown RBP26.83■■□□□ 1.89
CHRNA7-228ENST00000637519 LRP6O75581 1613 aa26.83■■□□□ 1.89
CHRNA7-228ENST00000637519 GCKRQ14397 625 aa26.83■■□□□ 1.89
CHRNA7-228ENST00000637519 ERBB4Q15303 1308 aa26.83■■□□□ 1.88
CHRNA7-228ENST00000637519 IL1RAPL2Q9NP60 686 aa26.82■■□□□ 1.88
CHRNA7-228ENST00000637519 ZNF330Q9Y3S2 320 aaPredicted RBP26.82■■□□□ 1.88
CHRNA7-228ENST00000637519 PLBD2Q8NHP8 589 aa26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 ACSBG1Q96GR2 724 aa26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 NGLY1Q96IV0 654 aa26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 BICC1Q9H694 974 aaKnown RBP26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 UTYO14607 1347 aa26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 MARCH10Q8NA82 808 aaPredicted RBP26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 SLC4A9Q96Q91 983 aa26.81■■□□□ 1.88
CHRNA7-228ENST00000637519 CDCA7Q9BWT1 371 aaPredicted RBP26.8■■□□□ 1.88
CHRNA7-228ENST00000637519 ZBTB3Q9H5J0 574 aa26.8■■□□□ 1.88
CHRNA7-228ENST00000637519 UPF2Q9HAU5 1272 aaKnown RBP26.8■■□□□ 1.88
CHRNA7-228ENST00000637519 UNC5CLQ8IV45 518 aa26.8■■□□□ 1.88
CHRNA7-228ENST00000637519 SLC4A3P48751 1232 aa26.79■■□□□ 1.88
CHRNA7-228ENST00000637519 TBC1D9Q6ZT07 1266 aa26.79■■□□□ 1.88
CHRNA7-228ENST00000637519 TBC1D32Q96NH3 1257 aa26.79■■□□□ 1.88
CHRNA7-228ENST00000637519 PA2G4Q9UQ80 394 aaKnown RBP26.79■■□□□ 1.88
CHRNA7-228ENST00000637519 BCL9LQ86UU0 1499 aa26.79■■□□□ 1.88
CHRNA7-228ENST00000637519 MTX1Q13505 466 aa26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 FAM98CQ17RN3 349 aaKnown RBP26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 CERKQ8TCT0 537 aa26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 AFDNP55196 1824 aaKnown RBP26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 PDE1AP54750 535 aa26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 ERICH6Q7L0X2 663 aa26.78■■□□□ 1.88
CHRNA7-228ENST00000637519 SALL3Q9BXA9 1300 aa26.77■■□□□ 1.88
CHRNA7-228ENST00000637519 EPHA10Q5JZY3 1008 aa26.77■■□□□ 1.88
CHRNA7-228ENST00000637519 DDRGK1Q96HY6 314 aa26.77■■□□□ 1.88
CHRNA7-228ENST00000637519 NUP188Q5SRE5 1749 aa26.76■■□□□ 1.88
CHRNA7-228ENST00000637519 UBE3BQ7Z3V4 1068 aa26.76■■□□□ 1.87
CHRNA7-228ENST00000637519 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.75■■□□□ 1.87
CHRNA7-228ENST00000637519 BARGINQ6ZT62 677 aa26.75■■□□□ 1.87
CHRNA7-228ENST00000637519 SDSP20132 328 aa26.75■■□□□ 1.87
CHRNA7-228ENST00000637519 VSIG10Q8N0Z9 540 aa26.75■■□□□ 1.87
CHRNA7-228ENST00000637519 RHPN1Q8TCX5 695 aa26.75■■□□□ 1.87
CHRNA7-228ENST00000637519 NUTM1Q86Y26 1132 aa26.74■■□□□ 1.87
CHRNA7-228ENST00000637519 MX1P20591 662 aa26.74■■□□□ 1.87
CHRNA7-228ENST00000637519 RTL5Q5HYW3 569 aaPredicted RBP26.74■■□□□ 1.87
CHRNA7-228ENST00000637519 A0A087WZG4 1122 aa26.73■■□□□ 1.87
CHRNA7-228ENST00000637519 CDC45O75419 566 aa26.73■■□□□ 1.87
CHRNA7-228ENST00000637519 RAB11FIP3O75154 756 aa26.72■■□□□ 1.87
CHRNA7-228ENST00000637519 OS9Q13438 667 aaPredicted RBP26.72■■□□□ 1.87
CHRNA7-228ENST00000637519 KLHDC4Q8TBB5 520 aa26.72■■□□□ 1.87
CHRNA7-228ENST00000637519 C22orf23Q9BZE7 217 aa26.72■■□□□ 1.87
CHRNA7-228ENST00000637519 STARD3NLO95772 234 aa26.71■■□□□ 1.87
CHRNA7-228ENST00000637519 OSBPL3Q9H4L5 887 aa26.71■■□□□ 1.87
CHRNA7-228ENST00000637519 KIF1BPQ96EK5 621 aa26.7■■□□□ 1.87
CHRNA7-228ENST00000637519 ARXQ96QS3 562 aa26.7■■□□□ 1.87
CHRNA7-228ENST00000637519 HDAC5Q9UQL6 1122 aa26.7■■□□□ 1.87
CHRNA7-228ENST00000637519 CYP19A1P11511 503 aaPredicted RBP26.7■■□□□ 1.86
CHRNA7-228ENST00000637519 HSPA1LP34931 641 aa26.7■■□□□ 1.86
CHRNA7-228ENST00000637519 VPS72Q15906 364 aa26.7■■□□□ 1.86
CHRNA7-228ENST00000637519 TEX13AQ9BXU3 409 aaPredicted RBP26.7■■□□□ 1.86
CHRNA7-228ENST00000637519 ZBTB1Q9Y2K1 713 aa26.69■■□□□ 1.86
CHRNA7-228ENST00000637519 KCNQ2O43526 872 aa26.69■■□□□ 1.86
CHRNA7-228ENST00000637519 MYT1Q01538 1121 aa26.69■■□□□ 1.86
CHRNA7-228ENST00000637519 SIL1Q9H173 461 aa26.69■■□□□ 1.86
CHRNA7-228ENST00000637519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.69■■□□□ 1.86
CHRNA7-228ENST00000637519 TJP1Q07157 1748 aa26.68■■□□□ 1.86
CHRNA7-228ENST00000637519 CASP7P55210 303 aa26.68■■□□□ 1.86
CHRNA7-228ENST00000637519 FNBP4Q8N3X1 1017 aaPredicted RBP26.68■■□□□ 1.86
CHRNA7-228ENST00000637519 USP21Q9UK80 565 aa26.67■■□□□ 1.86
CHRNA7-228ENST00000637519 SPATA31A6Q5VVP1 1343 aa26.67■■□□□ 1.86
CHRNA7-228ENST00000637519 CWC25Q9NXE8 425 aaPredicted RBP26.66■■□□□ 1.86
CHRNA7-228ENST00000637519 HSP90AB4PQ58FF6 505 aa26.66■■□□□ 1.86
CHRNA7-228ENST00000637519 STAP2Q9UGK3 403 aa26.64■■□□□ 1.86
CHRNA7-228ENST00000637519 TUBGCP6Q96RT7 1819 aa26.63■■□□□ 1.85
CHRNA7-228ENST00000637519 KIF6Q6ZMV9 814 aa26.63■■□□□ 1.85
CHRNA7-228ENST00000637519 H7C1W4 665 aa26.62■■□□□ 1.85
CHRNA7-228ENST00000637519 SASH1O94885 1247 aa26.62■■□□□ 1.85
CHRNA7-228ENST00000637519 HLFQ16534 295 aa26.62■■□□□ 1.85
CHRNA7-228ENST00000637519 MEX3CQ5U5Q3 659 aaKnown RBP26.62■■□□□ 1.85
CHRNA7-228ENST00000637519 TRIM6-TRIM34B2RNG4 842 aa26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 MAP4K4O95819 1239 aaPredicted RBP26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 RABL6Q3YEC7 729 aaPredicted RBP26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 CCDC191Q8NCU4 936 aa26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 RILPL2Q969X0 211 aa26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 ISCA1Q9BUE6 129 aa26.61■■□□□ 1.85
CHRNA7-228ENST00000637519 PALLDQ8WX93 1383 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 ATP6V1AP38606 617 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 RFX5P48382 616 aaPredicted RBP26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 FOXO4P98177 505 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 G3BP1Q13283 466 aaKnown RBP eCLIP26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 TCIRG1Q13488 830 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 LMBR1LQ6UX01 489 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 PTF1AQ7RTS3 328 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 PI4K2BQ8TCG2 481 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 DAXXQ9UER7 740 aaPredicted RBP26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 CHMP3Q9Y3E7 222 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 MAP3K15Q6ZN16 1313 aa26.6■■□□□ 1.85
CHRNA7-228ENST00000637519 FAM182BQ5T319 152 aa26.59■■□□□ 1.85
CHRNA7-228ENST00000637519 LOC102724428A0A0B4J2F2 783 aa26.59■■□□□ 1.85
CHRNA7-228ENST00000637519 SIK1P57059 783 aa26.59■■□□□ 1.85
CHRNA7-228ENST00000637519 ITPK1Q13572 414 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms