RNA–Protein interactions for RNA: ENST00000636845.1

RYR3-223, Transcript of ryanodine receptor 3, human

TSL 5

Gene RYR3, Length 2,973 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RYR3-223	ENST00000636845	H2AFX	P16104	143 aa	Predicted RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CAST	P20810	708 aa	Known RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	ARID5B	Q14865	1188 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	FERMT3	Q86UX7	667 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	CCDC83	Q8IWF9	413 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	TDRD7	Q8NHU6	1098 aa	Known RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	SLC26A8	Q96RN1	970 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MYCBP	Q99417	103 aa	Predicted RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MEIS3	Q99687	375 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	DDX19A	Q9NUU7	478 aa	Known RBP	6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	EXOC6B	Q9Y2D4	811 aa		6.33	□□□□□ -1.4
RYR3-223	ENST00000636845	MYOM2	P54296	1465 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	PTPRC	P08575	1304 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	DTNB	O60941	627 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	LIG1	P18858	919 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	PLA2G4A	P47712	749 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	LMAN1	P49257	510 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	AK2	P54819	239 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	GYS2	P54840	703 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	SAFB2	Q14151	953 aa	Known RBP eCLIP	6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	TMEM132E	Q6IEE7	984 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	CCAR2	Q8N163	923 aa	Known RBP	6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	GPATCH11	Q8N954	259 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	C8orf58	Q8NAV2	365 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	SMARCE1	Q969G3	411 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	OSBPL3	Q9H4L5	887 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	POLK	Q9UBT6	870 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	USP16	Q9Y5T5	823 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	NFE2L2	Q16236	605 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	LARP1B	Q659C4	914 aa	Known RBP	6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	SLC4A10	Q6U841	1118 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	LEKR1	Q6ZMV7	388 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	TTC6	Q86TZ1	520 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	DEF6	Q9H4E7	631 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	CABP2	Q9NPB3	220 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	ARHGAP5	Q13017	1502 aa		6.32	□□□□□ -1.4
RYR3-223	ENST00000636845	KIF24	Q5T7B8	1368 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	ELP1	O95163	1332 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	CLGN	O14967	610 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	CAVIN2	O95810	425 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	OAS2	P29728	719 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	NOP2	P46087	812 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	ST5	P78524	1137 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	IRF5	Q13568	498 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	KRT24	Q2M2I5	525 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	SPATA32	Q96LK8	384 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	LRRCC1	Q9C099	1032 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	MTMR6	Q9Y217	621 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	RRP15	Q9Y3B9	282 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	FAM135B	Q49AJ0	1406 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	TARBP1	Q13395	1621 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	SAMD9L	Q8IVG5	1584 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845		A0A1B0GUL7	405 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	ABCB7	O75027	752 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	CDC25B	P30305	580 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	HSPA4	P34932	840 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	LMOD3	Q0VAK6	560 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	GNL2	Q13823	731 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	TTC31	Q49AM3	519 aa	Predicted RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	GOLGA5	Q8TBA6	731 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	SYTL4	Q96C24	671 aa	Predicted RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	ZCCHC17	Q9NP64	241 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	TFIP11	Q9UBB9	837 aa	Known RBP	6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	LCMT1	Q9UIC8	334 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	JRKL	Q9Y4A0	524 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	SSH2	Q76I76	1423 aa		6.31	□□□□□ -1.4
RYR3-223	ENST00000636845	FAM173B	Q6P4H8	233 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	SRL	Q86TD4	932 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	REM2	Q8IYK8	340 aa	Predicted RBP	6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	CCDC34	Q96HJ3	373 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	MRFAP1L1	Q96HT8	127 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	DRC1	Q96MC2	740 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	NCAPG	Q9BPX3	1015 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	BRMS1	Q9HCU9	246 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	NPHP3	Q7Z494	1330 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	SEC31A	O94979	1220 aa	Known RBP	6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	TPM1	P09493	284 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	GSDMD	P57764	484 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	SMC1A	Q14683	1233 aa	Known RBP	6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	RUFY3	Q7L099	469 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	PHACTR3	Q96KR7	559 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	TERF2IP	Q9NYB0	399 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	ATP10D	Q9P241	1426 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	SOX12	O15370	315 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	URI1	O94763	535 aa	Predicted RBP	6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	PDC	P20941	246 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	MLEC	Q14165	292 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	FBXO18	Q8NFZ0	1043 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	CLSTN2	Q9H4D0	955 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	L2HGDH	Q9H9P8	463 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	DNAI1	Q9UI46	699 aa		6.3	□□□□□ -1.4
RYR3-223	ENST00000636845	MSH6	P52701	1360 aa		6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	TRPM2	O94759	1503 aa		6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	CPA1	P15085	419 aa		6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	SFPQ	P23246	707 aa	Known RBP eCLIP	6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	GUCY2C	P25092	1073 aa		6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	CCZ1B	P86790	482 aa		6.29	□□□□□ -1.4
RYR3-223	ENST00000636845	CCZ1	P86791	482 aa	Predicted RBP	6.29	□□□□□ -1.4

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