RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 HMGB2P26583 209 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 KCNQ4P56696 695 aa9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 ADGRD1Q6QNK2 874 aa9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 CCDC146Q8IYE0 955 aa9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 PHACTR3Q96KR7 559 aa9.52□□□□□ -0.89
NPLOC4-221ENST00000625705 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
NPLOC4-221ENST00000625705 SLC52A2Q9HAB3 445 aa9.51□□□□□ -0.89
NPLOC4-221ENST00000625705 ASAP1Q9ULH1 1129 aa9.51□□□□□ -0.89
NPLOC4-221ENST00000625705 C5P01031 1676 aa9.51□□□□□ -0.89
NPLOC4-221ENST00000625705 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 ATP6V1AP38606 617 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 MFSD10Q14728 455 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 NEUROD2Q15784 382 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 NFE2L2Q16236 605 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 AK7Q96M32 723 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 KCNK17Q96T54 332 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 LGR6Q9HBX8 967 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 MRC1P22897 1456 aa9.5□□□□□ -0.89
NPLOC4-221ENST00000625705 DLG5Q8TDM6 1919 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 LOC102724428A0A0B4J2F2 783 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 SIK1P57059 783 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 MCM10Q7L590 875 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
NPLOC4-221ENST00000625705 EVI5O60447 810 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 RIPK4P57078 832 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 BBXQ8WY36 941 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 PLEKHF1Q96S99 279 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 LRRC4BQ9NT99 713 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 PAPPAQ13219 1627 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 ADAMTS7Q9UKP4 1686 aa9.48□□□□□ -0.89
NPLOC4-221ENST00000625705 TAF1LQ8IZX4 1826 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 EP400Q96L91 3159 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 BTBD11A6QL63 1104 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 TK2O00142 265 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 SLC39A6Q13433 755 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 CCDC184Q52MB2 194 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 DIEXFQ68CQ4 756 aaKnown RBP9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 FAM9BQ8IZU0 186 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 C4BP0C0L5 1744 aa9.47□□□□□ -0.89
NPLOC4-221ENST00000625705 SIPA1L3O60292 1781 aaPredicted RBP9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 GNPATO15228 680 aa9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 PHF14O94880 888 aa9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 FOSBP53539 338 aa9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 ZNF827Q17R98 1081 aa9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 CEMIPQ8WUJ3 1361 aa9.46□□□□□ -0.9
NPLOC4-221ENST00000625705 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-221ENST00000625705 THUMPD2Q9BTF0 503 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-221ENST00000625705 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
NPLOC4-221ENST00000625705 LAS1LQ9Y4W2 734 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-221ENST00000625705 APAF1O14727 1248 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 HRO43593 1189 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 ZBTB7AO95365 584 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 ITPK1Q13572 414 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 TAF7Q15545 349 aaPredicted RBP9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 ZNF790Q6PG37 636 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 LINC00116Q8NCU8 138 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 FMNL2Q96PY5 1086 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 ZNF831Q5JPB2 1677 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 TJP1Q07157 1748 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 UBR2Q8IWV8 1755 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 TUBGCP6Q96RT7 1819 aa9.44□□□□□ -0.9
NPLOC4-221ENST00000625705 COL5A3P25940 1745 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 QSER1Q2KHR3 1735 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 KCPQ6ZWJ8 1503 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 SENP3-EIF4A1A0A087X0R7 540 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 CALD1Q05682 793 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 DNAJC10Q8IXB1 793 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 SPON1Q9HCB6 807 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 TSPYL4Q9UJ04 414 aa9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 RTCBQ9Y3I0 505 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 ZNF330Q9Y3S2 320 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-221ENST00000625705 CASZ1Q86V15 1759 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 HEG1Q9ULI3 1381 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 PNPLA7Q6ZV29 1317 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 CNTNAP4Q9C0A0 1308 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 STARD3NLO95772 234 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 ZNF496Q96IT1 587 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 TEX13AQ9BXU3 409 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 CCDC87Q9NVE4 849 aa9.42□□□□□ -0.9
NPLOC4-221ENST00000625705 MIS18AQ9NYP9 233 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms