RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
LINC01943-201ENST00000625410 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
LINC01943-201ENST00000625410 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
LINC01943-201ENST00000625410 UTYO14607 1347 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 GNAI3P08754 354 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
LINC01943-201ENST00000625410 MYL6BP14649 208 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
LINC01943-201ENST00000625410 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
LINC01943-201ENST00000625410 A1BGP04217 495 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 POLA2Q14181 598 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 DDB1Q16531 1140 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 CWF19L2Q2TBE0 894 aaKnown RBP12.37□□□□□ -0.43
LINC01943-201ENST00000625410 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
LINC01943-201ENST00000625410 RREB1Q92766 1687 aa12.37□□□□□ -0.43
LINC01943-201ENST00000625410 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
LINC01943-201ENST00000625410 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
LINC01943-201ENST00000625410 LINS1Q8NG48 757 aa12.36□□□□□ -0.43
LINC01943-201ENST00000625410 METTL22Q9BUU2 404 aaPredicted RBP12.36□□□□□ -0.43
LINC01943-201ENST00000625410 CCDC9Q9Y3X0 531 aaKnown RBP12.36□□□□□ -0.43
LINC01943-201ENST00000625410 SALL3Q9BXA9 1300 aa12.36□□□□□ -0.43
LINC01943-201ENST00000625410 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
LINC01943-201ENST00000625410 BAG6P46379 1132 aa12.35□□□□□ -0.43
LINC01943-201ENST00000625410 ANKRD45Q5TZF3 282 aa12.35□□□□□ -0.43
LINC01943-201ENST00000625410 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
LINC01943-201ENST00000625410 OTUD7AQ8TE49 926 aaPredicted RBP12.35□□□□□ -0.43
LINC01943-201ENST00000625410 SSH3Q8TE77 659 aa12.35□□□□□ -0.43
LINC01943-201ENST00000625410 SEC24BO95487 1268 aa12.34□□□□□ -0.43
LINC01943-201ENST00000625410 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
LINC01943-201ENST00000625410 CASP7P55210 303 aa12.34□□□□□ -0.43
LINC01943-201ENST00000625410 MTX1Q13505 466 aa12.34□□□□□ -0.43
LINC01943-201ENST00000625410 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
LINC01943-201ENST00000625410 SUCLG2Q96I99 432 aa12.34□□□□□ -0.43
LINC01943-201ENST00000625410 SMARCA5O60264 1052 aaPredicted RBP12.33□□□□□ -0.44
LINC01943-201ENST00000625410 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
LINC01943-201ENST00000625410 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.44
LINC01943-201ENST00000625410 ANKRD13DQ6ZTN6 518 aa12.33□□□□□ -0.44
LINC01943-201ENST00000625410 PPP1R42Q7Z4L9 355 aa12.33□□□□□ -0.44
LINC01943-201ENST00000625410 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
LINC01943-201ENST00000625410 PLBD2Q8NHP8 589 aa12.33□□□□□ -0.44
LINC01943-201ENST00000625410 MYD88Q99836 296 aa12.33□□□□□ -0.44
LINC01943-201ENST00000625410 COL15A1P39059 1388 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
LINC01943-201ENST00000625410 GRM8O00222 908 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 GCKRQ14397 625 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
LINC01943-201ENST00000625410 KCNQ2O43526 872 aa12.31□□□□□ -0.44
LINC01943-201ENST00000625410 HMMRO75330 724 aa12.31□□□□□ -0.44
LINC01943-201ENST00000625410 GSPT1P15170 499 aaKnown RBP12.31□□□□□ -0.44
LINC01943-201ENST00000625410 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
LINC01943-201ENST00000625410 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
LINC01943-201ENST00000625410 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
LINC01943-201ENST00000625410 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
LINC01943-201ENST00000625410 NHSQ6T4R5 1651 aa12.3□□□□□ -0.44
LINC01943-201ENST00000625410 A0A0G2JS52 829 aa12.3□□□□□ -0.44
LINC01943-201ENST00000625410 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
LINC01943-201ENST00000625410 ITPK1Q13572 414 aa12.3□□□□□ -0.44
LINC01943-201ENST00000625410 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
LINC01943-201ENST00000625410 COL5A3P25940 1745 aaPredicted RBP12.3□□□□□ -0.44
LINC01943-201ENST00000625410 ATP5J2-PTCD1G3V325 749 aa12.29□□□□□ -0.44
LINC01943-201ENST00000625410 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
LINC01943-201ENST00000625410 RBM42Q9BTD8 480 aaKnown RBP12.29□□□□□ -0.44
LINC01943-201ENST00000625410 ISCA1Q9BUE6 129 aa12.29□□□□□ -0.44
LINC01943-201ENST00000625410 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
LINC01943-201ENST00000625410 BICC1Q9H694 974 aaKnown RBP12.29□□□□□ -0.44
LINC01943-201ENST00000625410 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
LINC01943-201ENST00000625410 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-201ENST00000625410 INTS5Q6P9B9 1019 aaKnown RBP12.28□□□□□ -0.44
LINC01943-201ENST00000625410 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-201ENST00000625410 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-201ENST00000625410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.28□□□□□ -0.44
LINC01943-201ENST00000625410 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
LINC01943-201ENST00000625410 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.44
LINC01943-201ENST00000625410 H7C1W4 665 aa12.27□□□□□ -0.45
LINC01943-201ENST00000625410 RABL6Q3YEC7 729 aaPredicted RBP12.27□□□□□ -0.45
LINC01943-201ENST00000625410 FAM182BQ5T319 152 aa12.27□□□□□ -0.45
LINC01943-201ENST00000625410 ZBTB3Q9H5J0 574 aa12.27□□□□□ -0.45
LINC01943-201ENST00000625410 C9orf78Q9NZ63 289 aaPredicted RBP12.27□□□□□ -0.45
LINC01943-201ENST00000625410 TNS1Q9HBL0 1735 aaKnown RBP12.26□□□□□ -0.45
LINC01943-201ENST00000625410 BTAF1O14981 1849 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 APBB1O00213 710 aa12.26□□□□□ -0.45
LINC01943-201ENST00000625410 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms