RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
CBWD3-216ENST00000621396 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
CBWD3-216ENST00000621396 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-216ENST00000621396 METTL22Q9BUU2 404 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-216ENST00000621396 C9orf78Q9NZ63 289 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-216ENST00000621396 UBTFL1P0CB47 393 aaPredicted RBP19.97■□□□□ 0.79
CBWD3-216ENST00000621396 LINS1Q8NG48 757 aa19.97■□□□□ 0.79
CBWD3-216ENST00000621396 PLBD2Q8NHP8 589 aa19.97■□□□□ 0.79
CBWD3-216ENST00000621396 GNAI2P04899 355 aa19.96■□□□□ 0.79
CBWD3-216ENST00000621396 HDAC1Q13547 482 aaPredicted RBP19.96■□□□□ 0.79
CBWD3-216ENST00000621396 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
CBWD3-216ENST00000621396 NEXNQ0ZGT2 675 aa19.96■□□□□ 0.79
CBWD3-216ENST00000621396 ATP10DQ9P241 1426 aa19.96■□□□□ 0.79
CBWD3-216ENST00000621396 NEURL1BA8MQ27 555 aa19.95■□□□□ 0.78
CBWD3-216ENST00000621396 PXDNLA1KZ92 1463 aa19.95■□□□□ 0.78
CBWD3-216ENST00000621396 GNAI3P08754 354 aa19.95■□□□□ 0.78
CBWD3-216ENST00000621396 HLFQ16534 295 aa19.95■□□□□ 0.78
CBWD3-216ENST00000621396 TJP1Q07157 1748 aa19.95■□□□□ 0.78
CBWD3-216ENST00000621396 PNMA6EA0A0J9YXQ4 647 aa19.94■□□□□ 0.78
CBWD3-216ENST00000621396 APBB1O00213 710 aa19.94■□□□□ 0.78
CBWD3-216ENST00000621396 FAM196AQ6ZSG2 479 aa19.94■□□□□ 0.78
CBWD3-216ENST00000621396 CCDC87Q9NVE4 849 aa19.94■□□□□ 0.78
CBWD3-216ENST00000621396 BTAF1O14981 1849 aa19.94■□□□□ 0.78
CBWD3-216ENST00000621396 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
CBWD3-216ENST00000621396 PDZRN3Q9UPQ7 1066 aa19.93■□□□□ 0.78
CBWD3-216ENST00000621396 GCKRQ14397 625 aa19.93■□□□□ 0.78
CBWD3-216ENST00000621396 ANKRD44Q8N8A2 993 aa19.93■□□□□ 0.78
CBWD3-216ENST00000621396 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
CBWD3-216ENST00000621396 GRM8O00222 908 aa19.92■□□□□ 0.78
CBWD3-216ENST00000621396 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
CBWD3-216ENST00000621396 NPM2Q86SE8 214 aaKnown RBP19.92■□□□□ 0.78
CBWD3-216ENST00000621396 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
CBWD3-216ENST00000621396 GPTP24298 496 aa19.91■□□□□ 0.78
CBWD3-216ENST00000621396 DZIP3Q86Y13 1208 aaKnown RBP19.91■□□□□ 0.78
CBWD3-216ENST00000621396 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
CBWD3-216ENST00000621396 MYH14Q7Z406 1995 aaKnown RBP19.91■□□□□ 0.78
CBWD3-216ENST00000621396 AMIGO3Q86WK7 504 aa19.91■□□□□ 0.78
CBWD3-216ENST00000621396 SBF2Q86WG5 1849 aa19.91■□□□□ 0.78
CBWD3-216ENST00000621396 NHSQ6T4R5 1651 aa19.9■□□□□ 0.78
CBWD3-216ENST00000621396 IL6STP40189 918 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-216ENST00000621396 EIF5P55010 431 aaKnown RBP19.9■□□□□ 0.78
CBWD3-216ENST00000621396 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
CBWD3-216ENST00000621396 RPAP2Q8IXW5 612 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-216ENST00000621396 A0A087WZG4 1122 aa19.9■□□□□ 0.78
CBWD3-216ENST00000621396 KAZALD1Q96I82 304 aa19.9■□□□□ 0.78
CBWD3-216ENST00000621396 SUCLG2Q96I99 432 aa19.9■□□□□ 0.78
CBWD3-216ENST00000621396 SMC5Q8IY18 1101 aa19.89■□□□□ 0.77
CBWD3-216ENST00000621396 PELP1Q8IZL8 1130 aaKnown RBP19.89■□□□□ 0.77
CBWD3-216ENST00000621396 LNPKQ9C0E8 428 aa19.89■□□□□ 0.77
CBWD3-216ENST00000621396 ARFGEF2Q9Y6D5 1785 aa19.89■□□□□ 0.77
CBWD3-216ENST00000621396 ANKRD45Q5TZF3 282 aa19.88■□□□□ 0.77
CBWD3-216ENST00000621396 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
CBWD3-216ENST00000621396 GOLGB1Q14789 3259 aaKnown RBP19.88■□□□□ 0.77
CBWD3-216ENST00000621396 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
CBWD3-216ENST00000621396 EXOC6BQ9Y2D4 811 aa19.88■□□□□ 0.77
CBWD3-216ENST00000621396 EPHA10Q5JZY3 1008 aa19.87■□□□□ 0.77
CBWD3-216ENST00000621396 BICC1Q9H694 974 aaKnown RBP19.87■□□□□ 0.77
CBWD3-216ENST00000621396 SRGAP3O43295 1099 aa19.87■□□□□ 0.77
CBWD3-216ENST00000621396 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
CBWD3-216ENST00000621396 ATP8B2P98198 1209 aa19.86■□□□□ 0.77
CBWD3-216ENST00000621396 TCIRG1Q13488 830 aa19.86■□□□□ 0.77
CBWD3-216ENST00000621396 FAM177BA6PVY3 158 aa19.86■□□□□ 0.77
CBWD3-216ENST00000621396 GNPATO15228 680 aa19.86■□□□□ 0.77
CBWD3-216ENST00000621396 GIGYF2Q6Y7W6 1299 aaKnown RBP19.86■□□□□ 0.77
CBWD3-216ENST00000621396 SMARCA5O60264 1052 aaPredicted RBP19.85■□□□□ 0.77
CBWD3-216ENST00000621396 N4BP2Q86UW6 1770 aaPredicted RBP19.85■□□□□ 0.77
CBWD3-216ENST00000621396 PHF14O94880 888 aa19.85■□□□□ 0.77
CBWD3-216ENST00000621396 FAM89AQ96GI7 184 aa19.85■□□□□ 0.77
CBWD3-216ENST00000621396 DCTPP1Q9H773 170 aa19.85■□□□□ 0.77
CBWD3-216ENST00000621396 CWC25Q9NXE8 425 aaPredicted RBP19.85■□□□□ 0.77
CBWD3-216ENST00000621396 PDE4AP27815 886 aa19.84■□□□□ 0.77
CBWD3-216ENST00000621396 PROM2Q8N271 834 aa19.84■□□□□ 0.77
CBWD3-216ENST00000621396 COL15A1P39059 1388 aa19.83■□□□□ 0.77
CBWD3-216ENST00000621396 APBA3O96018 575 aa19.83■□□□□ 0.77
CBWD3-216ENST00000621396 KLHDC4Q8TBB5 520 aa19.83■□□□□ 0.77
CBWD3-216ENST00000621396 GCC1Q96CN9 775 aa19.83■□□□□ 0.77
CBWD3-216ENST00000621396 NUP188Q5SRE5 1749 aa19.83■□□□□ 0.77
CBWD3-216ENST00000621396 UTYO14607 1347 aa19.83■□□□□ 0.76
CBWD3-216ENST00000621396 NUCB1Q02818 461 aa19.83■□□□□ 0.76
CBWD3-216ENST00000621396 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.76
CBWD3-216ENST00000621396 C16orf71Q8IYS4 520 aaPredicted RBP19.83■□□□□ 0.76
CBWD3-216ENST00000621396 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.76
CBWD3-216ENST00000621396 PA2G4Q9UQ80 394 aaKnown RBP19.83■□□□□ 0.76
CBWD3-216ENST00000621396 HMMRO75330 724 aa19.82■□□□□ 0.76
CBWD3-216ENST00000621396 CAMTA2O94983 1202 aa19.82■□□□□ 0.76
CBWD3-216ENST00000621396 CCDC191Q8NCU4 936 aa19.82■□□□□ 0.76
CBWD3-216ENST00000621396 AFDNP55196 1824 aaKnown RBP19.81■□□□□ 0.76
CBWD3-216ENST00000621396 UBN2Q6ZU65 1347 aa19.81■□□□□ 0.76
CBWD3-216ENST00000621396 CASP7P55210 303 aa19.81■□□□□ 0.76
CBWD3-216ENST00000621396 CCDC85AQ96PX6 553 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-216ENST00000621396 SRP68Q9UHB9 627 aaKnown RBP19.81■□□□□ 0.76
CBWD3-216ENST00000621396 ILDR1Q86SU0 546 aaPredicted RBP19.81■□□□□ 0.76
CBWD3-216ENST00000621396 COL5A3P25940 1745 aaPredicted RBP19.8■□□□□ 0.76
CBWD3-216ENST00000621396 H7C1W4 665 aa19.8■□□□□ 0.76
CBWD3-216ENST00000621396 SURF6O75683 361 aaKnown RBP19.8■□□□□ 0.76
CBWD3-216ENST00000621396 NLRP10Q86W26 655 aa19.8■□□□□ 0.76
CBWD3-216ENST00000621396 SSH3Q8TE77 659 aa19.8■□□□□ 0.76
CBWD3-216ENST00000621396 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
CBWD3-216ENST00000621396 BICDL1Q6ZP65 573 aa19.8■□□□□ 0.76
CBWD3-216ENST00000621396 OTUD7AQ8TE49 926 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms