RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
TNFAIP3-209ENST00000619035 DOT1LQ8TEK3 1739 aa15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 IGKV5-2P06315 115 aa15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 HSPA1LP34931 641 aa15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 PPP1R42Q7Z4L9 355 aa15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 C16orf71Q8IYS4 520 aaPredicted RBP15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.11
TNFAIP3-209ENST00000619035 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
TNFAIP3-209ENST00000619035 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
TNFAIP3-209ENST00000619035 DNAJC10Q8IXB1 793 aa15.76■□□□□ 0.11
TNFAIP3-209ENST00000619035 MARCH10Q8NA82 808 aaPredicted RBP15.76■□□□□ 0.11
TNFAIP3-209ENST00000619035 GRM8O00222 908 aa15.75■□□□□ 0.11
TNFAIP3-209ENST00000619035 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
TNFAIP3-209ENST00000619035 USP21Q9UK80 565 aa15.75■□□□□ 0.11
TNFAIP3-209ENST00000619035 NEURL1BA8MQ27 555 aa15.74■□□□□ 0.11
TNFAIP3-209ENST00000619035 TTLL7Q6ZT98 887 aa15.74■□□□□ 0.11
TNFAIP3-209ENST00000619035 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
TNFAIP3-209ENST00000619035 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
TNFAIP3-209ENST00000619035 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
TNFAIP3-209ENST00000619035 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 ZBTB3Q9H5J0 574 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 STARD3NLO95772 234 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 GCKRQ14397 625 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
TNFAIP3-209ENST00000619035 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
TNFAIP3-209ENST00000619035 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
TNFAIP3-209ENST00000619035 ARXQ96QS3 562 aa15.72■□□□□ 0.11
TNFAIP3-209ENST00000619035 POLA2Q14181 598 aa15.71■□□□□ 0.11
TNFAIP3-209ENST00000619035 BMP2KLQ5H9B9 411 aa15.71■□□□□ 0.11
TNFAIP3-209ENST00000619035 JARID2Q92833 1246 aaPredicted RBP15.71■□□□□ 0.11
TNFAIP3-209ENST00000619035 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
TNFAIP3-209ENST00000619035 UTYO14607 1347 aa15.7■□□□□ 0.1
TNFAIP3-209ENST00000619035 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
TNFAIP3-209ENST00000619035 THSD7AQ9UPZ6 1657 aa15.7■□□□□ 0.1
TNFAIP3-209ENST00000619035 MFAP1P55081 439 aaKnown RBP15.7■□□□□ 0.1
TNFAIP3-209ENST00000619035 AFDNP55196 1824 aaKnown RBP15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 CICQ96RK0 1608 aaPredicted RBP15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 A0A087WZG4 1122 aa15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 OS9Q13438 667 aaPredicted RBP15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 KAZALD1Q96I82 304 aa15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 DAXXQ9UER7 740 aaPredicted RBP15.69■□□□□ 0.1
TNFAIP3-209ENST00000619035 KCNQ2O43526 872 aa15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 MTX1Q13505 466 aa15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 RTL5Q5HYW3 569 aaPredicted RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 TTC22Q5TAA0 569 aa15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
TNFAIP3-209ENST00000619035 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 ATRNO75882 1429 aa15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 ONECUT3O60422 494 aaPredicted RBP15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 KIF6Q6ZMV9 814 aa15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 AFF2P51816 1311 aa15.67■□□□□ 0.1
TNFAIP3-209ENST00000619035 ZNF831Q5JPB2 1677 aa15.66■□□□□ 0.1
TNFAIP3-209ENST00000619035 RAB11FIP3O75154 756 aa15.66■□□□□ 0.1
TNFAIP3-209ENST00000619035 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
TNFAIP3-209ENST00000619035 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
TNFAIP3-209ENST00000619035 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
TNFAIP3-209ENST00000619035 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 COL15A1P39059 1388 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 PDE1AP54750 535 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 HSP90AB4PQ58FF6 505 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 TJP1Q07157 1748 aa15.65■□□□□ 0.1
TNFAIP3-209ENST00000619035 PALLDQ8WX93 1383 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 MX1P20591 662 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 FAM182BQ5T319 152 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 NUTM1Q86Y26 1132 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 KIF1BPQ96EK5 621 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 SIK1P57059 783 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 SIL1Q9H173 461 aa15.64■□□□□ 0.09
TNFAIP3-209ENST00000619035 TBC1D9Q6ZT07 1266 aa15.63■□□□□ 0.09
TNFAIP3-209ENST00000619035 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
TNFAIP3-209ENST00000619035 CDC45O75419 566 aa15.63■□□□□ 0.09
TNFAIP3-209ENST00000619035 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
TNFAIP3-209ENST00000619035 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
TNFAIP3-209ENST00000619035 MAP3K15Q6ZN16 1313 aa15.62■□□□□ 0.09
TNFAIP3-209ENST00000619035 SDSP20132 328 aa15.62■□□□□ 0.09
TNFAIP3-209ENST00000619035 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
TNFAIP3-209ENST00000619035 SALL3Q9BXA9 1300 aa15.62■□□□□ 0.09
TNFAIP3-209ENST00000619035 IL6STP40189 918 aaPredicted RBP15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 CASP7P55210 303 aa15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 TCIRG1Q13488 830 aa15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 H7C1W4 665 aa15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 G3BP1Q13283 466 aaKnown RBP eCLIP15.61■□□□□ 0.09
TNFAIP3-209ENST00000619035 ITPK1Q13572 414 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms