RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 UTYO14607 1347 aa31.25■■■□□ 2.59
VEGFC-202ENST00000618562 IBTKQ9P2D0 1353 aaPredicted RBP31.25■■■□□ 2.59
VEGFC-202ENST00000618562 A1BGP04217 495 aa31.25■■■□□ 2.59
VEGFC-202ENST00000618562 HSCBQ8IWL3 235 aa31.25■■■□□ 2.59
VEGFC-202ENST00000618562 DDB1Q16531 1140 aa31.25■■■□□ 2.59
VEGFC-202ENST00000618562 OTUD7AQ8TE49 926 aaPredicted RBP31.25■■■□□ 2.59
VEGFC-202ENST00000618562 GRM8O00222 908 aa31.24■■■□□ 2.59
VEGFC-202ENST00000618562 EIF5BO60841 1220 aaKnown RBP31.24■■■□□ 2.59
VEGFC-202ENST00000618562 NEXNQ0ZGT2 675 aa31.24■■■□□ 2.59
VEGFC-202ENST00000618562 CERKQ8TCT0 537 aa31.24■■■□□ 2.59
VEGFC-202ENST00000618562 SNX21Q969T3 373 aa31.24■■■□□ 2.59
VEGFC-202ENST00000618562 NEURL1BA8MQ27 555 aa31.23■■■□□ 2.59
VEGFC-202ENST00000618562 BARGINQ6ZT62 677 aa31.23■■■□□ 2.59
VEGFC-202ENST00000618562 MYD88Q99836 296 aa31.23■■■□□ 2.59
VEGFC-202ENST00000618562 CCDC9Q9Y3X0 531 aaKnown RBP31.23■■■□□ 2.59
VEGFC-202ENST00000618562 AEBP2Q6ZN18 517 aaPredicted RBP31.22■■■□□ 2.59
VEGFC-202ENST00000618562 TBC1D9Q6ZT07 1266 aa31.22■■■□□ 2.59
VEGFC-202ENST00000618562 UNC5CLQ8IV45 518 aa31.22■■■□□ 2.59
VEGFC-202ENST00000618562 AFDNP55196 1824 aaKnown RBP31.22■■■□□ 2.59
VEGFC-202ENST00000618562 SRGAP3O43295 1099 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 VSIG10Q8N0Z9 540 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 PLBD2Q8NHP8 589 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 NUP188Q5SRE5 1749 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 BCL9LQ86UU0 1499 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 MTX1Q13505 466 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 C8orf37Q96NL8 207 aa31.21■■■□□ 2.59
VEGFC-202ENST00000618562 CDC45O75419 566 aa31.2■■■□□ 2.59
VEGFC-202ENST00000618562 LRRCC1Q9C099 1032 aa31.2■■■□□ 2.58
VEGFC-202ENST00000618562 GCKRQ14397 625 aa31.19■■■□□ 2.58
VEGFC-202ENST00000618562 CHMP5Q9NZZ3 219 aa31.19■■■□□ 2.58
VEGFC-202ENST00000618562 GSPT1P15170 499 aaKnown RBP31.18■■■□□ 2.58
VEGFC-202ENST00000618562 SYTL4Q96C24 671 aaPredicted RBP31.18■■■□□ 2.58
VEGFC-202ENST00000618562 NGLY1Q96IV0 654 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 HDAC5Q9UQL6 1122 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 PRIM1P49642 420 aaKnown RBP31.18■■■□□ 2.58
VEGFC-202ENST00000618562 TTLL7Q6ZT98 887 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 DNAJC10Q8IXB1 793 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 MARCH10Q8NA82 808 aaPredicted RBP31.18■■■□□ 2.58
VEGFC-202ENST00000618562 KAZALD1Q96I82 304 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 SUCLG2Q96I99 432 aa31.18■■■□□ 2.58
VEGFC-202ENST00000618562 RBM42Q9BTD8 480 aaKnown RBP31.17■■■□□ 2.58
VEGFC-202ENST00000618562 TTC22Q5TAA0 569 aa31.17■■■□□ 2.58
VEGFC-202ENST00000618562 TEX13AQ9BXU3 409 aaPredicted RBP31.17■■■□□ 2.58
VEGFC-202ENST00000618562 SPATA31A6Q5VVP1 1343 aa31.15■■■□□ 2.58
VEGFC-202ENST00000618562 SURF6O75683 361 aaKnown RBP31.15■■■□□ 2.58
VEGFC-202ENST00000618562 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.15■■■□□ 2.58
VEGFC-202ENST00000618562 SLC4A9Q96Q91 983 aa31.14■■■□□ 2.58
VEGFC-202ENST00000618562 VPS72Q15906 364 aa31.13■■■□□ 2.57
VEGFC-202ENST00000618562 SALL3Q9BXA9 1300 aa31.13■■■□□ 2.57
VEGFC-202ENST00000618562 FNBP4Q8N3X1 1017 aaPredicted RBP31.13■■■□□ 2.57
VEGFC-202ENST00000618562 ATP5J2-PTCD1G3V325 749 aa31.12■■■□□ 2.57
VEGFC-202ENST00000618562 RAB11FIP3O75154 756 aa31.12■■■□□ 2.57
VEGFC-202ENST00000618562 KIF2CQ99661 725 aa31.12■■■□□ 2.57
VEGFC-202ENST00000618562 BICC1Q9H694 974 aaKnown RBP31.12■■■□□ 2.57
VEGFC-202ENST00000618562 OSBPL3Q9H4L5 887 aa31.12■■■□□ 2.57
VEGFC-202ENST00000618562 SPRYD3Q8NCJ5 442 aa31.11■■■□□ 2.57
VEGFC-202ENST00000618562 PDE1AP54750 535 aa31.1■■■□□ 2.57
VEGFC-202ENST00000618562 FAM98CQ17RN3 349 aaKnown RBP31.1■■■□□ 2.57
VEGFC-202ENST00000618562 TJP1Q07157 1748 aa31.1■■■□□ 2.57
VEGFC-202ENST00000618562 STARD3NLO95772 234 aa31.1■■■□□ 2.57
VEGFC-202ENST00000618562 RHPN1Q8TCX5 695 aa31.08■■■□□ 2.57
VEGFC-202ENST00000618562 ACSBG1Q96GR2 724 aa31.08■■■□□ 2.57
VEGFC-202ENST00000618562 ZBTB3Q9H5J0 574 aa31.08■■■□□ 2.57
VEGFC-202ENST00000618562 DDIT3P35638 169 aa31.07■■■□□ 2.56
VEGFC-202ENST00000618562 IL1RAPL2Q9NP60 686 aa31.07■■■□□ 2.56
VEGFC-202ENST00000618562 TUBGCP6Q96RT7 1819 aa31.06■■■□□ 2.56
VEGFC-202ENST00000618562 CYP19A1P11511 503 aaPredicted RBP31.06■■■□□ 2.56
VEGFC-202ENST00000618562 EPHA10Q5JZY3 1008 aa31.06■■■□□ 2.56
VEGFC-202ENST00000618562 JARID2Q92833 1246 aaPredicted RBP31.06■■■□□ 2.56
VEGFC-202ENST00000618562 KIF1BPQ96EK5 621 aa31.06■■■□□ 2.56
VEGFC-202ENST00000618562 HSP90AB4PQ58FF6 505 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 UBE3BQ7Z3V4 1068 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 A0A087WZG4 1122 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 MX1P20591 662 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 MCM4P33991 863 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 COL15A1P39059 1388 aa31.05■■■□□ 2.56
VEGFC-202ENST00000618562 HSPA1LP34931 641 aa31.04■■■□□ 2.56
VEGFC-202ENST00000618562 CASP7P55210 303 aa31.04■■■□□ 2.56
VEGFC-202ENST00000618562 CIZ1Q9ULV3 898 aaPredicted RBP31.04■■■□□ 2.56
VEGFC-202ENST00000618562 PA2G4Q9UQ80 394 aaKnown RBP31.04■■■□□ 2.56
VEGFC-202ENST00000618562 SDSP20132 328 aa31.04■■■□□ 2.56
VEGFC-202ENST00000618562 USP21Q9UK80 565 aa31.04■■■□□ 2.56
VEGFC-202ENST00000618562 ZNF330Q9Y3S2 320 aaPredicted RBP31.04■■■□□ 2.56
VEGFC-202ENST00000618562 TSHZ3Q63HK5 1081 aa31.03■■■□□ 2.56
VEGFC-202ENST00000618562 A0A0G2JS52 829 aa31.02■■■□□ 2.56
VEGFC-202ENST00000618562 STAP2Q9UGK3 403 aa31.02■■■□□ 2.56
VEGFC-202ENST00000618562 CWC25Q9NXE8 425 aaPredicted RBP31.01■■■□□ 2.55
VEGFC-202ENST00000618562 H7C1W4 665 aa31■■■□□ 2.55
VEGFC-202ENST00000618562 OS9Q13438 667 aaPredicted RBP30.99■■■□□ 2.55
VEGFC-202ENST00000618562 CASC1Q6TDU7 716 aa30.99■■■□□ 2.55
VEGFC-202ENST00000618562 RABL6Q3YEC7 729 aaPredicted RBP30.99■■■□□ 2.55
VEGFC-202ENST00000618562 CCDC191Q8NCU4 936 aa30.99■■■□□ 2.55
VEGFC-202ENST00000618562 ZBTB1Q9Y2K1 713 aa30.99■■■□□ 2.55
VEGFC-202ENST00000618562 NUTM1Q86Y26 1132 aa30.98■■■□□ 2.55
VEGFC-202ENST00000618562 K7ELQ4 463 aaPredicted RBP30.97■■■□□ 2.55
VEGFC-202ENST00000618562 KIF6Q6ZMV9 814 aa30.97■■■□□ 2.55
VEGFC-202ENST00000618562 ISCA1Q9BUE6 129 aa30.97■■■□□ 2.55
VEGFC-202ENST00000618562 THSD7AQ9UPZ6 1657 aa30.97■■■□□ 2.55
VEGFC-202ENST00000618562 KCNQ2O43526 872 aa30.96■■■□□ 2.55
VEGFC-202ENST00000618562 TCIRG1Q13488 830 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms