RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 A1BGP04217 495 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 ITPK1Q13572 414 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 LINS1Q8NG48 757 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 F6X3S4 739 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 SRCIN1Q9C0H9 1055 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 CCDC87Q9NVE4 849 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 MAP3K2Q9Y2U5 619 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 MYH3P11055 1940 aa14.81□□□□□ -0.04
PDPN-211ENST00000617617 ANXA1P04083 346 aa14.8□□□□□ -0.04
PDPN-211ENST00000617617 GNAI3P08754 354 aa14.8□□□□□ -0.04
PDPN-211ENST00000617617 SLC27A3Q5K4L6 730 aa14.8□□□□□ -0.04
PDPN-211ENST00000617617 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
PDPN-211ENST00000617617 ERVV-1B6SEH8 477 aa14.8□□□□□ -0.04
PDPN-211ENST00000617617 EIF5P55010 431 aaKnown RBP14.8□□□□□ -0.04
PDPN-211ENST00000617617 TUBGCP6Q96RT7 1819 aa14.8□□□□□ -0.04
PDPN-211ENST00000617617 MYL6BP14649 208 aa14.79□□□□□ -0.04
PDPN-211ENST00000617617 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
PDPN-211ENST00000617617 TRIM28Q13263 835 aaKnown RBP14.79□□□□□ -0.04
PDPN-211ENST00000617617 PTF1AQ7RTS3 328 aa14.79□□□□□ -0.04
PDPN-211ENST00000617617 CRKLP46109 303 aaKnown RBP14.79□□□□□ -0.04
PDPN-211ENST00000617617 HDAC5Q9UQL6 1122 aa14.79□□□□□ -0.04
PDPN-211ENST00000617617 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
PDPN-211ENST00000617617 PLSCR1O15162 318 aa14.78□□□□□ -0.04
PDPN-211ENST00000617617 MAP3K15Q6ZN16 1313 aa14.78□□□□□ -0.04
PDPN-211ENST00000617617 B4GALNT3Q6L9W6 998 aa14.78□□□□□ -0.04
PDPN-211ENST00000617617 RPAP2Q8IXW5 612 aaPredicted RBP14.78□□□□□ -0.04
PDPN-211ENST00000617617 USP44Q9H0E7 712 aa14.78□□□□□ -0.04
PDPN-211ENST00000617617 RIC3Q7Z5B4 369 aa14.77□□□□□ -0.04
PDPN-211ENST00000617617 LINC00116Q8NCU8 138 aa14.77□□□□□ -0.04
PDPN-211ENST00000617617 A0A087WZG4 1122 aa14.77□□□□□ -0.05
PDPN-211ENST00000617617 NEXNQ0ZGT2 675 aa14.77□□□□□ -0.05
PDPN-211ENST00000617617 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
PDPN-211ENST00000617617 ZBTB1Q9Y2K1 713 aa14.77□□□□□ -0.05
PDPN-211ENST00000617617 NEURL1BA8MQ27 555 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 SLC4A10Q6U841 1118 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 KIF6Q6ZMV9 814 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 ANKRD44Q8N8A2 993 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 MEIS3Q99687 375 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
PDPN-211ENST00000617617 HSP90AB3PQ58FF7 597 aa14.75□□□□□ -0.05
PDPN-211ENST00000617617 FAM182BQ5T319 152 aa14.75□□□□□ -0.05
PDPN-211ENST00000617617 TTLL7Q6ZT98 887 aa14.75□□□□□ -0.05
PDPN-211ENST00000617617 GNAI2P04899 355 aa14.75□□□□□ -0.05
PDPN-211ENST00000617617 GIGYF2Q6Y7W6 1299 aaKnown RBP14.74□□□□□ -0.05
PDPN-211ENST00000617617 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
PDPN-211ENST00000617617 DDX60Q8IY21 1712 aaKnown RBP14.74□□□□□ -0.05
PDPN-211ENST00000617617 AIMP1Q12904 312 aaKnown RBP14.74□□□□□ -0.05
PDPN-211ENST00000617617 MTX1Q13505 466 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 CCDC191Q8NCU4 936 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 RPS6KA4O75676 772 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 TCIRG1Q13488 830 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 GCKRQ14397 625 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 SMC5Q8IY18 1101 aa14.74□□□□□ -0.05
PDPN-211ENST00000617617 IGHDP01880 384 aa14.73□□□□□ -0.05
PDPN-211ENST00000617617 GRM8O00222 908 aa14.73□□□□□ -0.05
PDPN-211ENST00000617617 PIP4K2AP48426 406 aaPredicted RBP14.73□□□□□ -0.05
PDPN-211ENST00000617617 SIRT2Q8IXJ6 389 aa14.73□□□□□ -0.05
PDPN-211ENST00000617617 TRIM37O94972 964 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 UBTFL1P0CB47 393 aaPredicted RBP14.72□□□□□ -0.05
PDPN-211ENST00000617617 ADRA2BP18089 450 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 CASP7P55210 303 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 CLEC4GQ6UXB4 293 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 GCC1Q96CN9 775 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 MYD88Q99836 296 aa14.72□□□□□ -0.05
PDPN-211ENST00000617617 H7C1W4 665 aa14.71□□□□□ -0.05
PDPN-211ENST00000617617 CAMTA2O94983 1202 aa14.71□□□□□ -0.05
PDPN-211ENST00000617617 ATP8B2P98198 1209 aa14.71□□□□□ -0.05
PDPN-211ENST00000617617 DZIP3Q86Y13 1208 aaKnown RBP14.71□□□□□ -0.05
PDPN-211ENST00000617617 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 CDHR2Q9BYE9 1310 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 POLA2Q14181 598 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 CWC25Q9NXE8 425 aaPredicted RBP14.7□□□□□ -0.06
PDPN-211ENST00000617617 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
PDPN-211ENST00000617617 PLA2G12BQ9BX93 195 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 LRRC4BQ9NT99 713 aa14.7□□□□□ -0.06
PDPN-211ENST00000617617 HMMRO75330 724 aa14.69□□□□□ -0.06
PDPN-211ENST00000617617 NBPF7P0C2Y1 421 aaPredicted RBP14.69□□□□□ -0.06
PDPN-211ENST00000617617 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
PDPN-211ENST00000617617 SSH3Q8TE77 659 aa14.69□□□□□ -0.06
PDPN-211ENST00000617617 NRXN2Q9P2S2 1712 aa14.69□□□□□ -0.06
PDPN-211ENST00000617617 RABL6Q3YEC7 729 aaPredicted RBP14.69□□□□□ -0.06
PDPN-211ENST00000617617 C9orf78Q9NZ63 289 aaPredicted RBP14.69□□□□□ -0.06
PDPN-211ENST00000617617 AK7Q96M32 723 aa14.68□□□□□ -0.06
PDPN-211ENST00000617617 ZBTB3Q9H5J0 574 aa14.68□□□□□ -0.06
PDPN-211ENST00000617617 NARFQ9UHQ1 456 aa14.68□□□□□ -0.06
PDPN-211ENST00000617617 PROM2Q8N271 834 aa14.68□□□□□ -0.06
PDPN-211ENST00000617617 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
PDPN-211ENST00000617617 PCCAP05165 728 aaPredicted RBP14.67□□□□□ -0.06
PDPN-211ENST00000617617 TXNRD1Q16881 649 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 PARP10Q53GL7 1025 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 KAZALD1Q96I82 304 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 SSFA2P28290 1259 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 HLFQ16534 295 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms