RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 C8orf34Q49A92 452 aa27.7■■■□□ 2.03
PPFIA3-211ENST00000602848 SSH3Q8TE77 659 aa27.7■■■□□ 2.03
PPFIA3-211ENST00000602848 A1BGP04217 495 aa27.7■■■□□ 2.02
PPFIA3-211ENST00000602848 SYTL4Q96C24 671 aaPredicted RBP27.7■■■□□ 2.02
PPFIA3-211ENST00000602848 RBM42Q9BTD8 480 aaKnown RBP27.7■■■□□ 2.02
PPFIA3-211ENST00000602848 GRM8O00222 908 aa27.69■■■□□ 2.02
PPFIA3-211ENST00000602848 NEURL1BA8MQ27 555 aa27.68■■■□□ 2.02
PPFIA3-211ENST00000602848 IGKV5-2P06315 115 aa27.68■■■□□ 2.02
PPFIA3-211ENST00000602848 MTX1Q13505 466 aa27.68■■■□□ 2.02
PPFIA3-211ENST00000602848 DNAJC10Q8IXB1 793 aa27.68■■■□□ 2.02
PPFIA3-211ENST00000602848 CWF19L2Q2TBE0 894 aaKnown RBP27.67■■■□□ 2.02
PPFIA3-211ENST00000602848 POLA2Q14181 598 aa27.67■■■□□ 2.02
PPFIA3-211ENST00000602848 SMARCC1Q92922 1105 aaPredicted RBP27.67■■■□□ 2.02
PPFIA3-211ENST00000602848 MYD88Q99836 296 aa27.67■■■□□ 2.02
PPFIA3-211ENST00000602848 A0A0G2JS52 829 aa27.66■■■□□ 2.02
PPFIA3-211ENST00000602848 MYT1Q01538 1121 aa27.66■■■□□ 2.02
PPFIA3-211ENST00000602848 GCKRQ14397 625 aa27.66■■■□□ 2.02
PPFIA3-211ENST00000602848 ARFGEF2Q9Y6D5 1785 aa27.66■■■□□ 2.02
PPFIA3-211ENST00000602848 PNMA6EA0A0J9YXQ4 647 aa27.65■■■□□ 2.02
PPFIA3-211ENST00000602848 PIP4K2AP48426 406 aaPredicted RBP27.64■■■□□ 2.02
PPFIA3-211ENST00000602848 PPP1R42Q7Z4L9 355 aa27.64■■■□□ 2.02
PPFIA3-211ENST00000602848 RAB11FIP3O75154 756 aa27.63■■■□□ 2.01
PPFIA3-211ENST00000602848 CYP19A1P11511 503 aaPredicted RBP27.63■■■□□ 2.01
PPFIA3-211ENST00000602848 COL15A1P39059 1388 aa27.63■■■□□ 2.01
PPFIA3-211ENST00000602848 HSP90AB4PQ58FF6 505 aa27.62■■■□□ 2.01
PPFIA3-211ENST00000602848 CICQ96RK0 1608 aaPredicted RBP27.62■■■□□ 2.01
PPFIA3-211ENST00000602848 SLC4A9Q96Q91 983 aa27.61■■■□□ 2.01
PPFIA3-211ENST00000602848 NUP188Q5SRE5 1749 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 SRGAP3O43295 1099 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 BMP2KLQ5H9B9 411 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 TTLL7Q6ZT98 887 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 KRT27Q7Z3Y8 459 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 KAT6BQ8WYB5 2073 aa27.6■■■□□ 2.01
PPFIA3-211ENST00000602848 ACSBG1Q96GR2 724 aa27.59■■■□□ 2.01
PPFIA3-211ENST00000602848 LRRCC1Q9C099 1032 aa27.59■■■□□ 2.01
PPFIA3-211ENST00000602848 KIF6Q6ZMV9 814 aa27.59■■■□□ 2.01
PPFIA3-211ENST00000602848 TJP1Q07157 1748 aa27.58■■■□□ 2.01
PPFIA3-211ENST00000602848 CCDC191Q8NCU4 936 aa27.58■■■□□ 2.01
PPFIA3-211ENST00000602848 NOP58Q9Y2X3 529 aaKnown RBP27.58■■■□□ 2.01
PPFIA3-211ENST00000602848 ZNF831Q5JPB2 1677 aa27.57■■■□□ 2
PPFIA3-211ENST00000602848 PLEKHM2Q8IWE5 1019 aa27.57■■■□□ 2
PPFIA3-211ENST00000602848 IL6STP40189 918 aaPredicted RBP27.56■■■□□ 2
PPFIA3-211ENST00000602848 TRIM28Q13263 835 aaKnown RBP27.56■■■□□ 2
PPFIA3-211ENST00000602848 EXOC6BQ9Y2D4 811 aa27.56■■■□□ 2
PPFIA3-211ENST00000602848 AFDNP55196 1824 aaKnown RBP27.56■■■□□ 2
PPFIA3-211ENST00000602848 FAM182BQ5T319 152 aa27.56■■■□□ 2
PPFIA3-211ENST00000602848 SUCLG2Q96I99 432 aa27.56■■■□□ 2
PPFIA3-211ENST00000602848 LOC102724428A0A0B4J2F2 783 aa27.55■■■□□ 2
PPFIA3-211ENST00000602848 SIK1P57059 783 aa27.55■■■□□ 2
PPFIA3-211ENST00000602848 CWC25Q9NXE8 425 aaPredicted RBP27.55■■■□□ 2
PPFIA3-211ENST00000602848 H7C1W4 665 aa27.54■■■□□ 2
PPFIA3-211ENST00000602848 SURF6O75683 361 aaKnown RBP27.54■■■□□ 2
PPFIA3-211ENST00000602848 TCIRG1Q13488 830 aa27.54■■■□□ 2
PPFIA3-211ENST00000602848 KAZALD1Q96I82 304 aa27.54■■■□□ 2
PPFIA3-211ENST00000602848 PALLDQ8WX93 1383 aa27.54■■■□□ 2
PPFIA3-211ENST00000602848 A0A087WZG4 1122 aa27.53■■■□□ 2
PPFIA3-211ENST00000602848 ANP32AP39687 249 aaKnown RBP27.53■■■□□ 2
PPFIA3-211ENST00000602848 ISCA1Q9BUE6 129 aa27.53■■■□□ 2
PPFIA3-211ENST00000602848 OSBPL3Q9H4L5 887 aa27.53■■■□□ 2
PPFIA3-211ENST00000602848 MAP3K15Q6ZN16 1313 aa27.53■■■□□ 2
PPFIA3-211ENST00000602848 EP400Q96L91 3159 aa27.53■■■□□ 2
PPFIA3-211ENST00000602848 ATP6V1AP38606 617 aa27.52■■■□□ 2
PPFIA3-211ENST00000602848 HSP90AB3PQ58FF7 597 aa27.52■■■□□ 2
PPFIA3-211ENST00000602848 NPM2Q86SE8 214 aaKnown RBP27.52■■■□□ 2
PPFIA3-211ENST00000602848 ZBTB3Q9H5J0 574 aa27.52■■■□□ 2
PPFIA3-211ENST00000602848 ATP5J2-PTCD1G3V325 749 aa27.52■■■□□ 2
PPFIA3-211ENST00000602848 BICC1Q9H694 974 aaKnown RBP27.52■■■□□ 2
PPFIA3-211ENST00000602848 ERVV-1B6SEH8 477 aa27.51■■□□□ 1.99
PPFIA3-211ENST00000602848 CASP7P55210 303 aa27.51■■□□□ 1.99
PPFIA3-211ENST00000602848 ERC1Q8IUD2 1116 aa27.51■■□□□ 1.99
PPFIA3-211ENST00000602848 KIF1BPQ96EK5 621 aa27.51■■□□□ 1.99
PPFIA3-211ENST00000602848 CCDC87Q9NVE4 849 aa27.51■■□□□ 1.99
PPFIA3-211ENST00000602848 APBB1O00213 710 aa27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 KCNQ2O43526 872 aa27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 SMARCA5O60264 1052 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 EIF5BO60841 1220 aaKnown RBP27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 RABL6Q3YEC7 729 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 GIGYF2Q6Y7W6 1299 aaKnown RBP27.5■■□□□ 1.99
PPFIA3-211ENST00000602848 C16orf71Q8IYS4 520 aaPredicted RBP27.49■■□□□ 1.99
PPFIA3-211ENST00000602848 ZBTB1Q9Y2K1 713 aa27.49■■□□□ 1.99
PPFIA3-211ENST00000602848 RREB1Q92766 1687 aa27.49■■□□□ 1.99
PPFIA3-211ENST00000602848 TTC22Q5TAA0 569 aa27.49■■□□□ 1.99
PPFIA3-211ENST00000602848 UBE3BQ7Z3V4 1068 aa27.49■■□□□ 1.99
PPFIA3-211ENST00000602848 SBF2Q86WG5 1849 aa27.48■■□□□ 1.99
PPFIA3-211ENST00000602848 RHPN1Q8TCX5 695 aa27.48■■□□□ 1.99
PPFIA3-211ENST00000602848 EIF5P55010 431 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-211ENST00000602848 INTS5Q6P9B9 1019 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-211ENST00000602848 UPF2Q9HAU5 1272 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-211ENST00000602848 NHSQ6T4R5 1651 aa27.47■■□□□ 1.99
PPFIA3-211ENST00000602848 STAP2Q9UGK3 403 aa27.46■■□□□ 1.99
PPFIA3-211ENST00000602848 ZNF330Q9Y3S2 320 aaPredicted RBP27.46■■□□□ 1.99
PPFIA3-211ENST00000602848 AOX1Q06278 1338 aa27.46■■□□□ 1.99
PPFIA3-211ENST00000602848 SALL3Q9BXA9 1300 aa27.46■■□□□ 1.99
PPFIA3-211ENST00000602848 CRKLP46109 303 aaKnown RBP27.45■■□□□ 1.99
PPFIA3-211ENST00000602848 PDE1AP54750 535 aa27.45■■□□□ 1.98
PPFIA3-211ENST00000602848 ITPK1Q13572 414 aa27.44■■□□□ 1.98
PPFIA3-211ENST00000602848 FAM196AQ6ZSG2 479 aa27.44■■□□□ 1.98
PPFIA3-211ENST00000602848 DZIP3Q86Y13 1208 aaKnown RBP27.43■■□□□ 1.98
PPFIA3-211ENST00000602848 G3BP1Q13283 466 aaKnown RBP eCLIP27.42■■□□□ 1.98
PPFIA3-211ENST00000602848 OS9Q13438 667 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms