RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
SHKBP1-224ENST00000600718 UTYO14607 1347 aa22.03■■□□□ 1.12
SHKBP1-224ENST00000600718 LOC102724428A0A0B4J2F2 783 aa22.03■■□□□ 1.12
SHKBP1-224ENST00000600718 NEURL1BA8MQ27 555 aa22.03■■□□□ 1.12
SHKBP1-224ENST00000600718 SIK1P57059 783 aa22.03■■□□□ 1.12
SHKBP1-224ENST00000600718 TTLL7Q6ZT98 887 aa22.03■■□□□ 1.12
SHKBP1-224ENST00000600718 GRM8O00222 908 aa22.02■■□□□ 1.12
SHKBP1-224ENST00000600718 ATP6V1AP38606 617 aa22.02■■□□□ 1.12
SHKBP1-224ENST00000600718 ANKRD45Q5TZF3 282 aa22.01■■□□□ 1.11
SHKBP1-224ENST00000600718 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-224ENST00000600718 CHD1LQ86WJ1 897 aa22.01■■□□□ 1.11
SHKBP1-224ENST00000600718 GCKRQ14397 625 aa22.01■■□□□ 1.11
SHKBP1-224ENST00000600718 TJP1Q07157 1748 aa22■■□□□ 1.11
SHKBP1-224ENST00000600718 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
SHKBP1-224ENST00000600718 KIF6Q6ZMV9 814 aa21.99■■□□□ 1.11
SHKBP1-224ENST00000600718 ARFGEF2Q9Y6D5 1785 aa21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 PNMA6EA0A0J9YXQ4 647 aa21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 SSH3Q8TE77 659 aa21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 ZBTB3Q9H5J0 574 aa21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 ZBTB1Q9Y2K1 713 aa21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-224ENST00000600718 CICQ96RK0 1608 aaPredicted RBP21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 PDE4AP27815 886 aa21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 ITPK1Q13572 414 aa21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 LNPKQ9C0E8 428 aa21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
SHKBP1-224ENST00000600718 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 MTX1Q13505 466 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 FAM182BQ5T319 152 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 INTS5Q6P9B9 1019 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 PPP1R42Q7Z4L9 355 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 ZBTB47Q9UFB7 747 aaPredicted RBP21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 NHSQ6T4R5 1651 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 POLA2Q14181 598 aa21.96■■□□□ 1.11
SHKBP1-224ENST00000600718 MAP3K15Q6ZN16 1313 aa21.95■■□□□ 1.1
SHKBP1-224ENST00000600718 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
SHKBP1-224ENST00000600718 CRKLP46109 303 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-224ENST00000600718 RBM6P78332 1123 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-224ENST00000600718 NUP188Q5SRE5 1749 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 TCIRG1Q13488 830 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 PTF1AQ7RTS3 328 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 SRGAP3O43295 1099 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 CWC25Q9NXE8 425 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-224ENST00000600718 A0A087WZG4 1122 aa21.93■■□□□ 1.1
SHKBP1-224ENST00000600718 EIF5P55010 431 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-224ENST00000600718 TRIM28Q13263 835 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-224ENST00000600718 FBXO41Q8TF61 875 aa21.93■■□□□ 1.1
SHKBP1-224ENST00000600718 ISCA1Q9BUE6 129 aa21.93■■□□□ 1.1
SHKBP1-224ENST00000600718 ERVV-1B6SEH8 477 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 KRT27Q7Z3Y8 459 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 ARXQ96QS3 562 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 BACH2Q9BYV9 841 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 COL15A1P39059 1388 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 H7C1W4 665 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 FAM196AQ6ZSG2 479 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 KAZALD1Q96I82 304 aa21.92■■□□□ 1.1
SHKBP1-224ENST00000600718 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
SHKBP1-224ENST00000600718 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
SHKBP1-224ENST00000600718 BCL11BQ9C0K0 894 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-224ENST00000600718 DZIP3Q86Y13 1208 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 CASP7P55210 303 aa21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 UBE3BQ7Z3V4 1068 aa21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 EXOC6BQ9Y2D4 811 aa21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 RREB1Q92766 1687 aa21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 BTAF1O14981 1849 aa21.9■■□□□ 1.1
SHKBP1-224ENST00000600718 AFDNP55196 1824 aaKnown RBP21.89■■□□□ 1.1
SHKBP1-224ENST00000600718 RAB11FIP3O75154 756 aa21.89■■□□□ 1.09
SHKBP1-224ENST00000600718 HSP90AB4PQ58FF6 505 aa21.88■■□□□ 1.09
SHKBP1-224ENST00000600718 SURF6O75683 361 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-224ENST00000600718 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
SHKBP1-224ENST00000600718 LRRCC1Q9C099 1032 aa21.88■■□□□ 1.09
SHKBP1-224ENST00000600718 SBF2Q86WG5 1849 aa21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 APBB1O00213 710 aa21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 HLFQ16534 295 aa21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 RC3H1Q5TC82 1133 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 NOP58Q9Y2X3 529 aaKnown RBP21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 CNTNAP4Q9C0A0 1308 aa21.87■■□□□ 1.09
SHKBP1-224ENST00000600718 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-224ENST00000600718 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
SHKBP1-224ENST00000600718 SMARCA5O60264 1052 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 RABL6Q3YEC7 729 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 CCNL1Q9UK58 526 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 RXRBP28702 533 aa21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 EPHA10Q5JZY3 1008 aa21.85■■□□□ 1.09
SHKBP1-224ENST00000600718 PLEKHM2Q8IWE5 1019 aa21.84■■□□□ 1.09
SHKBP1-224ENST00000600718 PCCAP05165 728 aaPredicted RBP21.83■■□□□ 1.09
SHKBP1-224ENST00000600718 C16orf71Q8IYS4 520 aaPredicted RBP21.83■■□□□ 1.09
SHKBP1-224ENST00000600718 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.09
SHKBP1-224ENST00000600718 NLRP10Q86W26 655 aa21.83■■□□□ 1.08
SHKBP1-224ENST00000600718 KIF1BPQ96EK5 621 aa21.83■■□□□ 1.08
SHKBP1-224ENST00000600718 KCNQ4P56696 695 aa21.82■■□□□ 1.08
SHKBP1-224ENST00000600718 FOXO4P98177 505 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms