RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SMARCC1Q92922 1105 aaPredicted RBP18.98■□□□□ 0.63
VRK3-218ENST00000600031 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
VRK3-218ENST00000600031 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 ATP6V1AP38606 617 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 PLBD2Q8NHP8 589 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 DDRGK1Q96HY6 314 aa18.98■□□□□ 0.63
VRK3-218ENST00000600031 IGKV5-2P06315 115 aa18.97■□□□□ 0.63
VRK3-218ENST00000600031 NBPF7P0C2Y1 421 aaPredicted RBP18.97■□□□□ 0.63
VRK3-218ENST00000600031 RPAP2Q8IXW5 612 aaPredicted RBP18.97■□□□□ 0.63
VRK3-218ENST00000600031 SMC5Q8IY18 1101 aa18.97■□□□□ 0.63
VRK3-218ENST00000600031 UBTFL1P0CB47 393 aaPredicted RBP18.97■□□□□ 0.63
VRK3-218ENST00000600031 MYD88Q99836 296 aa18.97■□□□□ 0.63
VRK3-218ENST00000600031 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
VRK3-218ENST00000600031 NHSQ6T4R5 1651 aa18.96■□□□□ 0.63
VRK3-218ENST00000600031 ITPK1Q13572 414 aa18.96■□□□□ 0.63
VRK3-218ENST00000600031 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
VRK3-218ENST00000600031 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
VRK3-218ENST00000600031 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
VRK3-218ENST00000600031 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
VRK3-218ENST00000600031 ZNF330Q9Y3S2 320 aaPredicted RBP18.95■□□□□ 0.62
VRK3-218ENST00000600031 BRWD3Q6RI45 1802 aa18.95■□□□□ 0.62
VRK3-218ENST00000600031 SBF2Q86WG5 1849 aa18.95■□□□□ 0.62
VRK3-218ENST00000600031 NEXNQ0ZGT2 675 aa18.95■□□□□ 0.62
VRK3-218ENST00000600031 BTAF1O14981 1849 aa18.95■□□□□ 0.62
VRK3-218ENST00000600031 NEURL1BA8MQ27 555 aa18.94■□□□□ 0.62
VRK3-218ENST00000600031 ZBTB3Q9H5J0 574 aa18.94■□□□□ 0.62
VRK3-218ENST00000600031 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
VRK3-218ENST00000600031 INTS5Q6P9B9 1019 aaKnown RBP18.93■□□□□ 0.62
VRK3-218ENST00000600031 KRT27Q7Z3Y8 459 aa18.93■□□□□ 0.62
VRK3-218ENST00000600031 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
VRK3-218ENST00000600031 CICQ96RK0 1608 aaPredicted RBP18.92■□□□□ 0.62
VRK3-218ENST00000600031 RGS3P49796 1198 aa18.92■□□□□ 0.62
VRK3-218ENST00000600031 ATP5J2-PTCD1G3V325 749 aa18.92■□□□□ 0.62
VRK3-218ENST00000600031 GRM8O00222 908 aa18.92■□□□□ 0.62
VRK3-218ENST00000600031 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
VRK3-218ENST00000600031 CRKLP46109 303 aaKnown RBP18.91■□□□□ 0.62
VRK3-218ENST00000600031 KCNQ4P56696 695 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 GCKRQ14397 625 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 UTYO14607 1347 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 PNMA6EA0A0J9YXQ4 647 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 IL6STP40189 918 aaPredicted RBP18.91■□□□□ 0.62
VRK3-218ENST00000600031 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
VRK3-218ENST00000600031 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
VRK3-218ENST00000600031 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
VRK3-218ENST00000600031 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
VRK3-218ENST00000600031 EP400Q96L91 3159 aa18.9■□□□□ 0.62
VRK3-218ENST00000600031 ZNF831Q5JPB2 1677 aa18.89■□□□□ 0.62
VRK3-218ENST00000600031 FAM161AQ3B820 660 aa18.89■□□□□ 0.62
VRK3-218ENST00000600031 KIF6Q6ZMV9 814 aa18.89■□□□□ 0.62
VRK3-218ENST00000600031 ARXQ96QS3 562 aa18.89■□□□□ 0.62
VRK3-218ENST00000600031 AFDNP55196 1824 aaKnown RBP18.89■□□□□ 0.61
VRK3-218ENST00000600031 HMMRO75330 724 aa18.89■□□□□ 0.61
VRK3-218ENST00000600031 NUCB1Q02818 461 aa18.89■□□□□ 0.61
VRK3-218ENST00000600031 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
VRK3-218ENST00000600031 LINC00116Q8NCU8 138 aa18.89■□□□□ 0.61
VRK3-218ENST00000600031 COL5A3P25940 1745 aaPredicted RBP18.88■□□□□ 0.61
VRK3-218ENST00000600031 EIF5P55010 431 aaKnown RBP18.88■□□□□ 0.61
VRK3-218ENST00000600031 BCL11BQ9C0K0 894 aaPredicted RBP18.88■□□□□ 0.61
VRK3-218ENST00000600031 RREB1Q92766 1687 aa18.88■□□□□ 0.61
VRK3-218ENST00000600031 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
VRK3-218ENST00000600031 RXRBP28702 533 aa18.88■□□□□ 0.61
VRK3-218ENST00000600031 ANKRD45Q5TZF3 282 aa18.88■□□□□ 0.61
VRK3-218ENST00000600031 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
VRK3-218ENST00000600031 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
VRK3-218ENST00000600031 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
VRK3-218ENST00000600031 KAZALD1Q96I82 304 aa18.87■□□□□ 0.61
VRK3-218ENST00000600031 TCIRG1Q13488 830 aa18.86■□□□□ 0.61
VRK3-218ENST00000600031 HLFQ16534 295 aa18.86■□□□□ 0.61
VRK3-218ENST00000600031 CHD1LQ86WJ1 897 aa18.86■□□□□ 0.61
VRK3-218ENST00000600031 LNPKQ9C0E8 428 aa18.86■□□□□ 0.61
VRK3-218ENST00000600031 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
VRK3-218ENST00000600031 A0A087WZG4 1122 aa18.85■□□□□ 0.61
VRK3-218ENST00000600031 GIGYF2Q6Y7W6 1299 aaKnown RBP18.85■□□□□ 0.61
VRK3-218ENST00000600031 DZIP3Q86Y13 1208 aaKnown RBP18.85■□□□□ 0.61
VRK3-218ENST00000600031 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
VRK3-218ENST00000600031 ISCA1Q9BUE6 129 aa18.85■□□□□ 0.61
VRK3-218ENST00000600031 CWC25Q9NXE8 425 aaPredicted RBP18.85■□□□□ 0.61
VRK3-218ENST00000600031 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
VRK3-218ENST00000600031 HDAC5Q9UQL6 1122 aa18.85■□□□□ 0.61
VRK3-218ENST00000600031 LY75O60449 1722 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 TRIM37O94972 964 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 POLA2Q14181 598 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 UBE3BQ7Z3V4 1068 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
VRK3-218ENST00000600031 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
VRK3-218ENST00000600031 SRGAP3O43295 1099 aa18.83■□□□□ 0.61
VRK3-218ENST00000600031 CASP7P55210 303 aa18.83■□□□□ 0.61
VRK3-218ENST00000600031 H7C1W4 665 aa18.83■□□□□ 0.6
VRK3-218ENST00000600031 MTX1Q13505 466 aa18.83■□□□□ 0.6
VRK3-218ENST00000600031 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
VRK3-218ENST00000600031 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.6
VRK3-218ENST00000600031 ERVV-1B6SEH8 477 aa18.82■□□□□ 0.6
VRK3-218ENST00000600031 EPHA10Q5JZY3 1008 aa18.82■□□□□ 0.6
VRK3-218ENST00000600031 CNTNAP4Q9C0A0 1308 aa18.82■□□□□ 0.6
VRK3-218ENST00000600031 APBB1O00213 710 aa18.82■□□□□ 0.6
VRK3-218ENST00000600031 TRIM28Q13263 835 aaKnown RBP18.82■□□□□ 0.6
VRK3-218ENST00000600031 NUP98P52948 1817 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms