RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 NBPF14Q5TI25 921 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 NBPF10Q6P3W6 841 aaKnown RBP22.72■■□□□ 1.23
CTDP1-205ENST00000590599 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 NBPF15Q8N660 670 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 TJP1Q07157 1748 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 SMARCC1Q92922 1105 aaPredicted RBP22.7■■□□□ 1.22
CTDP1-205ENST00000590599 ARFGEF2Q9Y6D5 1785 aa22.7■■□□□ 1.22
CTDP1-205ENST00000590599 KCNQ4P56696 695 aa22.69■■□□□ 1.22
CTDP1-205ENST00000590599 TXNRD1Q16881 649 aa22.69■■□□□ 1.22
CTDP1-205ENST00000590599 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
CTDP1-205ENST00000590599 SLC4A9Q96Q91 983 aa22.69■■□□□ 1.22
CTDP1-205ENST00000590599 PALLDQ8WX93 1383 aa22.69■■□□□ 1.22
CTDP1-205ENST00000590599 ALDH1L1O75891 902 aa22.68■■□□□ 1.22
CTDP1-205ENST00000590599 GNAI2P04899 355 aa22.68■■□□□ 1.22
CTDP1-205ENST00000590599 NEXNQ0ZGT2 675 aa22.68■■□□□ 1.22
CTDP1-205ENST00000590599 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
CTDP1-205ENST00000590599 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
CTDP1-205ENST00000590599 PDGFDQ9GZP0 370 aaPredicted RBP22.68■■□□□ 1.22
CTDP1-205ENST00000590599 UBTFL1P0CB47 393 aaPredicted RBP22.67■■□□□ 1.22
CTDP1-205ENST00000590599 USP44Q9H0E7 712 aa22.67■■□□□ 1.22
CTDP1-205ENST00000590599 CICQ96RK0 1608 aaPredicted RBP22.67■■□□□ 1.22
CTDP1-205ENST00000590599 CEP85Q6P2H3 762 aa22.66■■□□□ 1.22
CTDP1-205ENST00000590599 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
CTDP1-205ENST00000590599 CYP19A1P11511 503 aaPredicted RBP22.66■■□□□ 1.22
CTDP1-205ENST00000590599 SIRT2Q8IXJ6 389 aa22.66■■□□□ 1.22
CTDP1-205ENST00000590599 PLBD2Q8NHP8 589 aa22.66■■□□□ 1.22
CTDP1-205ENST00000590599 METTL22Q9BUU2 404 aaPredicted RBP22.66■■□□□ 1.22
CTDP1-205ENST00000590599 LOC102724428A0A0B4J2F2 783 aa22.65■■□□□ 1.22
CTDP1-205ENST00000590599 SIK1P57059 783 aa22.65■■□□□ 1.22
CTDP1-205ENST00000590599 SMC5Q8IY18 1101 aa22.65■■□□□ 1.22
CTDP1-205ENST00000590599 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
CTDP1-205ENST00000590599 ATP6V1AP38606 617 aa22.64■■□□□ 1.22
CTDP1-205ENST00000590599 CWF19L2Q2TBE0 894 aaKnown RBP22.64■■□□□ 1.22
CTDP1-205ENST00000590599 SKAP1Q86WV1 359 aa22.64■■□□□ 1.22
CTDP1-205ENST00000590599 ZNF330Q9Y3S2 320 aaPredicted RBP22.64■■□□□ 1.22
CTDP1-205ENST00000590599 MYD88Q99836 296 aa22.63■■□□□ 1.21
CTDP1-205ENST00000590599 LY75O60449 1722 aa22.63■■□□□ 1.21
CTDP1-205ENST00000590599 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
CTDP1-205ENST00000590599 TTLL7Q6ZT98 887 aa22.63■■□□□ 1.21
CTDP1-205ENST00000590599 GCC1Q96CN9 775 aa22.63■■□□□ 1.21
CTDP1-205ENST00000590599 C9orf78Q9NZ63 289 aaPredicted RBP22.63■■□□□ 1.21
CTDP1-205ENST00000590599 LRRFIP2Q9Y608 721 aaKnown RBP22.63■■□□□ 1.21
CTDP1-205ENST00000590599 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
CTDP1-205ENST00000590599 IBTKQ9P2D0 1353 aaPredicted RBP22.62■■□□□ 1.21
CTDP1-205ENST00000590599 HMMRO75330 724 aa22.62■■□□□ 1.21
CTDP1-205ENST00000590599 PDZRN3Q9UPQ7 1066 aa22.62■■□□□ 1.21
CTDP1-205ENST00000590599 IGKV5-2P06315 115 aa22.61■■□□□ 1.21
CTDP1-205ENST00000590599 NBPF7P0C2Y1 421 aaPredicted RBP22.61■■□□□ 1.21
CTDP1-205ENST00000590599 KIF6Q6ZMV9 814 aa22.61■■□□□ 1.21
CTDP1-205ENST00000590599 LRP5O75197 1615 aa22.6■■□□□ 1.21
CTDP1-205ENST00000590599 NEURL1BA8MQ27 555 aa22.6■■□□□ 1.21
CTDP1-205ENST00000590599 RGS3P49796 1198 aa22.6■■□□□ 1.21
CTDP1-205ENST00000590599 HDAC5Q9UQL6 1122 aa22.6■■□□□ 1.21
CTDP1-205ENST00000590599 ZBTB1Q9Y2K1 713 aa22.6■■□□□ 1.21
CTDP1-205ENST00000590599 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
CTDP1-205ENST00000590599 GRM8O00222 908 aa22.59■■□□□ 1.21
CTDP1-205ENST00000590599 COL5A3P25940 1745 aaPredicted RBP22.59■■□□□ 1.21
CTDP1-205ENST00000590599 ZBTB3Q9H5J0 574 aa22.59■■□□□ 1.21
CTDP1-205ENST00000590599 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
CTDP1-205ENST00000590599 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.21
CTDP1-205ENST00000590599 ITPK1Q13572 414 aa22.58■■□□□ 1.2
CTDP1-205ENST00000590599 CCDC87Q9NVE4 849 aa22.58■■□□□ 1.2
CTDP1-205ENST00000590599 IL6STP40189 918 aaPredicted RBP22.57■■□□□ 1.2
CTDP1-205ENST00000590599 GCKRQ14397 625 aa22.57■■□□□ 1.2
CTDP1-205ENST00000590599 ZNF827Q17R98 1081 aa22.57■■□□□ 1.2
CTDP1-205ENST00000590599 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
CTDP1-205ENST00000590599 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
CTDP1-205ENST00000590599 UTYO14607 1347 aa22.56■■□□□ 1.2
CTDP1-205ENST00000590599 ATP5J2-PTCD1G3V325 749 aa22.55■■□□□ 1.2
CTDP1-205ENST00000590599 ATP8B2P98198 1209 aa22.55■■□□□ 1.2
CTDP1-205ENST00000590599 NUCB1Q02818 461 aa22.55■■□□□ 1.2
CTDP1-205ENST00000590599 ARXQ96QS3 562 aa22.55■■□□□ 1.2
CTDP1-205ENST00000590599 SLC15A2Q16348 729 aa22.54■■□□□ 1.2
CTDP1-205ENST00000590599 INTS5Q6P9B9 1019 aaKnown RBP22.54■■□□□ 1.2
CTDP1-205ENST00000590599 MAP3K15Q6ZN16 1313 aa22.54■■□□□ 1.2
CTDP1-205ENST00000590599 ANKRD45Q5TZF3 282 aa22.53■■□□□ 1.2
CTDP1-205ENST00000590599 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
CTDP1-205ENST00000590599 TAF1LQ8IZX4 1826 aa22.53■■□□□ 1.2
CTDP1-205ENST00000590599 PNMA6EA0A0J9YXQ4 647 aa22.53■■□□□ 1.2
CTDP1-205ENST00000590599 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
CTDP1-205ENST00000590599 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
CTDP1-205ENST00000590599 ZBTB7AO95365 584 aa22.52■■□□□ 1.2
CTDP1-205ENST00000590599 CWC25Q9NXE8 425 aaPredicted RBP22.52■■□□□ 1.2
CTDP1-205ENST00000590599 PPP1R42Q7Z4L9 355 aa22.51■■□□□ 1.19
CTDP1-205ENST00000590599 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
CTDP1-205ENST00000590599 EIF5P55010 431 aaKnown RBP22.5■■□□□ 1.19
CTDP1-205ENST00000590599 TCIRG1Q13488 830 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
CTDP1-205ENST00000590599 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 SUCLG2Q96I99 432 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 ANKRD36CQ5JPF3 1778 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 A0A087WZG4 1122 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 SRGAP3O43295 1099 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 CCDC191Q8NCU4 936 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 SSH3Q8TE77 659 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
CTDP1-205ENST00000590599 CCNL1Q9UK58 526 aaPredicted RBP22.5■■□□□ 1.19
CTDP1-205ENST00000590599 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
CTDP1-205ENST00000590599 UBE3BQ7Z3V4 1068 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms