RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
RANBP3-216ENST00000589353 DCTPP1Q9H773 170 aa12.46□□□□□ -0.41
RANBP3-216ENST00000589353 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
RANBP3-216ENST00000589353 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
RANBP3-216ENST00000589353 UTYO14607 1347 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 NEURL1BA8MQ27 555 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 KCNQ2O43526 872 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 PIP4K2AP48426 406 aaPredicted RBP12.45□□□□□ -0.42
RANBP3-216ENST00000589353 RGS3P49796 1198 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 NUCB1Q02818 461 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 HSP90AB4PQ58FF6 505 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 SIRT2Q8IXJ6 389 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 ZNF330Q9Y3S2 320 aaPredicted RBP12.45□□□□□ -0.42
RANBP3-216ENST00000589353 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
RANBP3-216ENST00000589353 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
RANBP3-216ENST00000589353 A0A087WZG4 1122 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 GCKRQ14397 625 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
RANBP3-216ENST00000589353 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 SLC4A9Q96Q91 983 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
RANBP3-216ENST00000589353 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-216ENST00000589353 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
RANBP3-216ENST00000589353 TCIRG1Q13488 830 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 ARXQ96QS3 562 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-216ENST00000589353 CWC25Q9NXE8 425 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-216ENST00000589353 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
RANBP3-216ENST00000589353 TJP1Q07157 1748 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 RXRBP28702 533 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 TRIM28Q13263 835 aaKnown RBP12.42□□□□□ -0.42
RANBP3-216ENST00000589353 MTX1Q13505 466 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
RANBP3-216ENST00000589353 SSH3Q8TE77 659 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 ZBTB1Q9Y2K1 713 aa12.42□□□□□ -0.42
RANBP3-216ENST00000589353 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
RANBP3-216ENST00000589353 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
RANBP3-216ENST00000589353 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
RANBP3-216ENST00000589353 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
RANBP3-216ENST00000589353 AFDNP55196 1824 aaKnown RBP12.41□□□□□ -0.42
RANBP3-216ENST00000589353 COL15A1P39059 1388 aa12.41□□□□□ -0.42
RANBP3-216ENST00000589353 CNTNAP4Q9C0A0 1308 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 BTAF1O14981 1849 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 ATP5J2-PTCD1G3V325 749 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 H7C1W4 665 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 RGL2O15211 777 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 POLA2Q14181 598 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 INTS5Q6P9B9 1019 aaKnown RBP12.4□□□□□ -0.42
RANBP3-216ENST00000589353 ISCA1Q9BUE6 129 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
RANBP3-216ENST00000589353 ZNF652Q9Y2D9 606 aa12.4□□□□□ -0.42
RANBP3-216ENST00000589353 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.43
RANBP3-216ENST00000589353 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
RANBP3-216ENST00000589353 ITPK1Q13572 414 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 FAM161AQ3B820 660 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 SBF2Q86WG5 1849 aa12.39□□□□□ -0.43
RANBP3-216ENST00000589353 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
RANBP3-216ENST00000589353 SURF6O75683 361 aaKnown RBP12.38□□□□□ -0.43
RANBP3-216ENST00000589353 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
RANBP3-216ENST00000589353 UBE3BQ7Z3V4 1068 aa12.38□□□□□ -0.43
RANBP3-216ENST00000589353 TSHZ2Q9NRE2 1034 aa12.38□□□□□ -0.43
RANBP3-216ENST00000589353 RREB1Q92766 1687 aa12.38□□□□□ -0.43
RANBP3-216ENST00000589353 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
RANBP3-216ENST00000589353 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
RANBP3-216ENST00000589353 PCCAP05165 728 aaPredicted RBP12.37□□□□□ -0.43
RANBP3-216ENST00000589353 PDE4AP27815 886 aa12.37□□□□□ -0.43
RANBP3-216ENST00000589353 OS9Q13438 667 aaPredicted RBP12.37□□□□□ -0.43
RANBP3-216ENST00000589353 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
RANBP3-216ENST00000589353 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
RANBP3-216ENST00000589353 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
RANBP3-216ENST00000589353 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
RANBP3-216ENST00000589353 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
RANBP3-216ENST00000589353 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
RANBP3-216ENST00000589353 PARP10Q53GL7 1025 aa12.36□□□□□ -0.43
RANBP3-216ENST00000589353 ZBTB38Q8NAP3 1195 aaPredicted RBP12.36□□□□□ -0.43
RANBP3-216ENST00000589353 LINC00116Q8NCU8 138 aa12.36□□□□□ -0.43
RANBP3-216ENST00000589353 TBC1D2BQ9UPU7 963 aa12.36□□□□□ -0.43
RANBP3-216ENST00000589353 EXOC6BQ9Y2D4 811 aa12.36□□□□□ -0.43
RANBP3-216ENST00000589353 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
RANBP3-216ENST00000589353 COL5A3P25940 1745 aaPredicted RBP12.36□□□□□ -0.43
RANBP3-216ENST00000589353 APBB1O00213 710 aa12.35□□□□□ -0.43
RANBP3-216ENST00000589353 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
RANBP3-216ENST00000589353 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
RANBP3-216ENST00000589353 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
RANBP3-216ENST00000589353 RTCBQ9Y3I0 505 aaKnown RBP12.35□□□□□ -0.43
RANBP3-216ENST00000589353 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms