RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
APOC1-201ENST00000586638 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
APOC1-201ENST00000586638 INTS3Q68E01 1043 aaKnown RBP12.85□□□□□ -0.35
APOC1-201ENST00000586638 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
APOC1-201ENST00000586638 SLC4A10Q6U841 1118 aa12.84□□□□□ -0.35
APOC1-201ENST00000586638 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
APOC1-201ENST00000586638 TJP1Q07157 1748 aa12.84□□□□□ -0.35
APOC1-201ENST00000586638 AFDNP55196 1824 aaKnown RBP12.83□□□□□ -0.35
APOC1-201ENST00000586638 ADCY9O60503 1353 aa12.83□□□□□ -0.36
APOC1-201ENST00000586638 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
APOC1-201ENST00000586638 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
APOC1-201ENST00000586638 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
APOC1-201ENST00000586638 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
APOC1-201ENST00000586638 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
APOC1-201ENST00000586638 AK7Q96M32 723 aa12.82□□□□□ -0.36
APOC1-201ENST00000586638 MEIS3Q99687 375 aa12.82□□□□□ -0.36
APOC1-201ENST00000586638 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
APOC1-201ENST00000586638 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
APOC1-201ENST00000586638 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
APOC1-201ENST00000586638 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
APOC1-201ENST00000586638 CCT4P50991 539 aaKnown RBP12.81□□□□□ -0.36
APOC1-201ENST00000586638 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
APOC1-201ENST00000586638 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
APOC1-201ENST00000586638 QSER1Q2KHR3 1735 aa12.81□□□□□ -0.36
APOC1-201ENST00000586638 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
APOC1-201ENST00000586638 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
APOC1-201ENST00000586638 PDIA6Q15084 440 aa12.8□□□□□ -0.36
APOC1-201ENST00000586638 PIGBQ92521 554 aa12.8□□□□□ -0.36
APOC1-201ENST00000586638 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
APOC1-201ENST00000586638 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
APOC1-201ENST00000586638 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
APOC1-201ENST00000586638 MYL6BP14649 208 aa12.79□□□□□ -0.36
APOC1-201ENST00000586638 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
APOC1-201ENST00000586638 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
APOC1-201ENST00000586638 ASAP1Q9ULH1 1129 aa12.79□□□□□ -0.36
APOC1-201ENST00000586638 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
APOC1-201ENST00000586638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
APOC1-201ENST00000586638 PHF14O94880 888 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 RGS3P49796 1198 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 LY75O60449 1722 aa12.78□□□□□ -0.36
APOC1-201ENST00000586638 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
APOC1-201ENST00000586638 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
APOC1-201ENST00000586638 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.37
APOC1-201ENST00000586638 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.37
APOC1-201ENST00000586638 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 HSPA6P17066 643 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 SSFA2P28290 1259 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 SIK1P57059 783 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
APOC1-201ENST00000586638 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
APOC1-201ENST00000586638 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 DNAJC10Q8IXB1 793 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
APOC1-201ENST00000586638 RBM42Q9BTD8 480 aaKnown RBP12.75□□□□□ -0.37
APOC1-201ENST00000586638 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
APOC1-201ENST00000586638 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 GNAI3P08754 354 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
APOC1-201ENST00000586638 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
APOC1-201ENST00000586638 GNPATO15228 680 aa12.73□□□□□ -0.37
APOC1-201ENST00000586638 A1BGP04217 495 aa12.73□□□□□ -0.37
APOC1-201ENST00000586638 GNAI2P04899 355 aa12.73□□□□□ -0.37
APOC1-201ENST00000586638 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
APOC1-201ENST00000586638 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
APOC1-201ENST00000586638 PDE4AP27815 886 aa12.72□□□□□ -0.37
APOC1-201ENST00000586638 ITPK1Q13572 414 aa12.72□□□□□ -0.37
APOC1-201ENST00000586638 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
APOC1-201ENST00000586638 SLC4A9Q96Q91 983 aa12.72□□□□□ -0.37
APOC1-201ENST00000586638 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
APOC1-201ENST00000586638 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
APOC1-201ENST00000586638 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 TTLL7Q6ZT98 887 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
APOC1-201ENST00000586638 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 MYD88Q99836 296 aa12.71□□□□□ -0.37
APOC1-201ENST00000586638 KIF3CO14782 793 aa12.7□□□□□ -0.38
APOC1-201ENST00000586638 IGKV5-2P06315 115 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms