RNA–Protein interactions for RNA: ENST00000583992.1

SNRPCP4-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 4, humanhuman

BASIC

Gene SNRPCP4, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP4-201ENST00000583992 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
SNRPCP4-201ENST00000583992 KIF6Q6ZMV9 814 aa13.6□□□□□ -0.23
SNRPCP4-201ENST00000583992 UTYO14607 1347 aa13.6□□□□□ -0.23
SNRPCP4-201ENST00000583992 NEURL1BA8MQ27 555 aa13.59□□□□□ -0.23
SNRPCP4-201ENST00000583992 IGKV5-2P06315 115 aa13.59□□□□□ -0.23
SNRPCP4-201ENST00000583992 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
SNRPCP4-201ENST00000583992 CYP19A1P11511 503 aaPredicted RBP13.59□□□□□ -0.23
SNRPCP4-201ENST00000583992 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
SNRPCP4-201ENST00000583992 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 PDE4AP27815 886 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 SIK1P57059 783 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 GCKRQ14397 625 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 NPM2Q86SE8 214 aaKnown RBP13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SNRPCP4-201ENST00000583992 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
SNRPCP4-201ENST00000583992 ZNF831Q5JPB2 1677 aa13.57□□□□□ -0.24
SNRPCP4-201ENST00000583992 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
SNRPCP4-201ENST00000583992 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
SNRPCP4-201ENST00000583992 ZBTB3Q9H5J0 574 aa13.57□□□□□ -0.24
SNRPCP4-201ENST00000583992 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 KCNQ2O43526 872 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 MTX1Q13505 466 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 PPP1R42Q7Z4L9 355 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 SSH3Q8TE77 659 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 ZBTB1Q9Y2K1 713 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 RREB1Q92766 1687 aa13.56□□□□□ -0.24
SNRPCP4-201ENST00000583992 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 POLA2Q14181 598 aa13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 MAP3K15Q6ZN16 1313 aa13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 COL15A1P39059 1388 aa13.55□□□□□ -0.24
SNRPCP4-201ENST00000583992 ATP5J2-PTCD1G3V325 749 aa13.54□□□□□ -0.24
SNRPCP4-201ENST00000583992 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
SNRPCP4-201ENST00000583992 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
SNRPCP4-201ENST00000583992 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
SNRPCP4-201ENST00000583992 BTAF1O14981 1849 aa13.54□□□□□ -0.24
SNRPCP4-201ENST00000583992 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 A0A087WZG4 1122 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 ITPK1Q13572 414 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 ARXQ96QS3 562 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 LRRCC1Q9C099 1032 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
SNRPCP4-201ENST00000583992 APBB1O00213 710 aa13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 CRKLP46109 303 aaKnown RBP13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 TCIRG1Q13488 830 aa13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 UBE3BQ7Z3V4 1068 aa13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
SNRPCP4-201ENST00000583992 ERVV-1B6SEH8 477 aa13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 TRIM28Q13263 835 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 INTS5Q6P9B9 1019 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
SNRPCP4-201ENST00000583992 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 SBF2Q86WG5 1849 aa13.5□□□□□ -0.25
SNRPCP4-201ENST00000583992 H7C1W4 665 aa13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 CASP7P55210 303 aa13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 RABL6Q3YEC7 729 aaPredicted RBP13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 BMP2KLQ5H9B9 411 aa13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 FAM196AQ6ZSG2 479 aa13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 NOP58Q9Y2X3 529 aaKnown RBP13.49□□□□□ -0.25
SNRPCP4-201ENST00000583992 PLEKHM2Q8IWE5 1019 aa13.48□□□□□ -0.25
SNRPCP4-201ENST00000583992 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
SNRPCP4-201ENST00000583992 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
SNRPCP4-201ENST00000583992 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
SNRPCP4-201ENST00000583992 LY75O60449 1722 aa13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 PCCAP05165 728 aaPredicted RBP13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 RHPN1Q8TCX5 695 aa13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
SNRPCP4-201ENST00000583992 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
SNRPCP4-201ENST00000583992 GPTP24298 496 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms