RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 GRM8O00222 908 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 NPM2Q86SE8 214 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-218ENST00000580391 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
CDK5RAP3-218ENST00000580391 PLBD2Q8NHP8 589 aa18.45■□□□□ 0.54
CDK5RAP3-218ENST00000580391 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
CDK5RAP3-218ENST00000580391 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-218ENST00000580391 UTYO14607 1347 aa18.44■□□□□ 0.54
CDK5RAP3-218ENST00000580391 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-218ENST00000580391 CICQ96RK0 1608 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-218ENST00000580391 POLA2Q14181 598 aa18.43■□□□□ 0.54
CDK5RAP3-218ENST00000580391 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-218ENST00000580391 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-218ENST00000580391 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
CDK5RAP3-218ENST00000580391 TUBGCP6Q96RT7 1819 aa18.43■□□□□ 0.54
CDK5RAP3-218ENST00000580391 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 GCKRQ14397 625 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 TEX13AQ9BXU3 409 aaPredicted RBP18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ANKRD36CQ5JPF3 1778 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 SEC24BO95487 1268 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 PLEKHM2Q8IWE5 1019 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
CDK5RAP3-218ENST00000580391 AFF2P51816 1311 aa18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ATP5J2-PTCD1G3V325 749 aa18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ANP32AP39687 249 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ZBTB3Q9H5J0 574 aa18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 STARD3NLO95772 234 aa18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 MTX1Q13505 466 aa18.41■□□□□ 0.54
CDK5RAP3-218ENST00000580391 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 RREB1Q92766 1687 aa18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 CYP19A1P11511 503 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 MYH14Q7Z406 1995 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-218ENST00000580391 NHSQ6T4R5 1651 aa18.39■□□□□ 0.54
CDK5RAP3-218ENST00000580391 BTAF1O14981 1849 aa18.39■□□□□ 0.53
CDK5RAP3-218ENST00000580391 NUP98P52948 1817 aa18.39■□□□□ 0.53
CDK5RAP3-218ENST00000580391 KCNQ2O43526 872 aa18.39■□□□□ 0.53
CDK5RAP3-218ENST00000580391 LRRCC1Q9C099 1032 aa18.39■□□□□ 0.53
CDK5RAP3-218ENST00000580391 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.53
CDK5RAP3-218ENST00000580391 ATRNO75882 1429 aa18.38■□□□□ 0.53
CDK5RAP3-218ENST00000580391 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP3-218ENST00000580391 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
CDK5RAP3-218ENST00000580391 SBF2Q86WG5 1849 aa18.38■□□□□ 0.53
CDK5RAP3-218ENST00000580391 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-218ENST00000580391 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
CDK5RAP3-218ENST00000580391 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
CDK5RAP3-218ENST00000580391 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
CDK5RAP3-218ENST00000580391 EPHA10Q5JZY3 1008 aa18.36■□□□□ 0.53
CDK5RAP3-218ENST00000580391 TTC22Q5TAA0 569 aa18.36■□□□□ 0.53
CDK5RAP3-218ENST00000580391 UBE3BQ7Z3V4 1068 aa18.36■□□□□ 0.53
CDK5RAP3-218ENST00000580391 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
CDK5RAP3-218ENST00000580391 A0A087WZG4 1122 aa18.35■□□□□ 0.53
CDK5RAP3-218ENST00000580391 GJD4Q96KN9 370 aaPredicted RBP18.35■□□□□ 0.53
CDK5RAP3-218ENST00000580391 CASP7P55210 303 aa18.35■□□□□ 0.53
CDK5RAP3-218ENST00000580391 KIF6Q6ZMV9 814 aa18.35■□□□□ 0.53
CDK5RAP3-218ENST00000580391 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
CDK5RAP3-218ENST00000580391 COL15A1P39059 1388 aa18.34■□□□□ 0.53
CDK5RAP3-218ENST00000580391 LOC102724428A0A0B4J2F2 783 aa18.34■□□□□ 0.53
CDK5RAP3-218ENST00000580391 SIK1P57059 783 aa18.34■□□□□ 0.53
CDK5RAP3-218ENST00000580391 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
CDK5RAP3-218ENST00000580391 AK9Q5TCS8 1911 aa18.33■□□□□ 0.53
CDK5RAP3-218ENST00000580391 MSH5O43196 834 aa18.33■□□□□ 0.53
CDK5RAP3-218ENST00000580391 RAB11FIP3O75154 756 aa18.33■□□□□ 0.53
CDK5RAP3-218ENST00000580391 RHPN1Q8TCX5 695 aa18.33■□□□□ 0.53
CDK5RAP3-218ENST00000580391 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
CDK5RAP3-218ENST00000580391 ATP6V1AP38606 617 aa18.33■□□□□ 0.52
CDK5RAP3-218ENST00000580391 ITPK1Q13572 414 aa18.33■□□□□ 0.52
CDK5RAP3-218ENST00000580391 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
CDK5RAP3-218ENST00000580391 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.52
CDK5RAP3-218ENST00000580391 PDE1AP54750 535 aa18.32■□□□□ 0.52
CDK5RAP3-218ENST00000580391 FAM182BQ5T319 152 aa18.32■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
CDK5RAP3-218ENST00000580391 ARXQ96QS3 562 aa18.32■□□□□ 0.52
CDK5RAP3-218ENST00000580391 BRWD3Q6RI45 1802 aa18.32■□□□□ 0.52
CDK5RAP3-218ENST00000580391 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 PTF1AQ7RTS3 328 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TRPC5Q9UL62 973 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 H7C1W4 665 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TCIRG1Q13488 830 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 CCDC191Q8NCU4 936 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
CDK5RAP3-218ENST00000580391 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 MX1P20591 662 aa18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 IL6STP40189 918 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 OS9Q13438 667 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 HSP90AB4PQ58FF6 505 aa18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 MYH3P11055 1940 aa18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 HLFQ16534 295 aa18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 INTS5Q6P9B9 1019 aaKnown RBP18.3■□□□□ 0.52
CDK5RAP3-218ENST00000580391 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms