RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 ITPK1Q13572 414 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 CENPQQ7L2Z9 268 aaPredicted RBP16.56■□□□□ 0.24
CTC1-203ENST00000578240 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 SIRT2Q8IXJ6 389 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 RGPD3A6NKT7 1758 aaPredicted RBP16.56■□□□□ 0.24
CTC1-203ENST00000578240 RGPD4Q7Z3J3 1758 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 SIK1P57059 783 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 FAM196AQ6ZSG2 479 aa16.56■□□□□ 0.24
CTC1-203ENST00000578240 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
CTC1-203ENST00000578240 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
CTC1-203ENST00000578240 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
CTC1-203ENST00000578240 HDAC1Q13547 482 aaPredicted RBP16.54■□□□□ 0.24
CTC1-203ENST00000578240 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
CTC1-203ENST00000578240 ZBTB1Q9Y2K1 713 aa16.54■□□□□ 0.24
CTC1-203ENST00000578240 LAMB2P55268 1798 aa16.54■□□□□ 0.24
CTC1-203ENST00000578240 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
CTC1-203ENST00000578240 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
CTC1-203ENST00000578240 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
CTC1-203ENST00000578240 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.23
CTC1-203ENST00000578240 CEP85Q6P2H3 762 aa16.52■□□□□ 0.23
CTC1-203ENST00000578240 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.23
CTC1-203ENST00000578240 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.23
CTC1-203ENST00000578240 TRIM37O94972 964 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 STARD3NLO95772 234 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
CTC1-203ENST00000578240 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 METTL22Q9BUU2 404 aaPredicted RBP16.51■□□□□ 0.23
CTC1-203ENST00000578240 COL24A1Q17RW2 1714 aa16.51■□□□□ 0.23
CTC1-203ENST00000578240 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
CTC1-203ENST00000578240 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
CTC1-203ENST00000578240 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 LINC00116Q8NCU8 138 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 NEURL1BA8MQ27 555 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 CRKLP46109 303 aaKnown RBP16.5■□□□□ 0.23
CTC1-203ENST00000578240 KCNQ4P56696 695 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
CTC1-203ENST00000578240 UTYO14607 1347 aa16.49■□□□□ 0.23
CTC1-203ENST00000578240 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
CTC1-203ENST00000578240 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
CTC1-203ENST00000578240 MYD88Q99836 296 aa16.49■□□□□ 0.23
CTC1-203ENST00000578240 RWDD1Q9H446 243 aaPredicted RBP16.48■□□□□ 0.23
CTC1-203ENST00000578240 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
CTC1-203ENST00000578240 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
CTC1-203ENST00000578240 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
CTC1-203ENST00000578240 GNAI3P08754 354 aa16.47■□□□□ 0.23
CTC1-203ENST00000578240 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
CTC1-203ENST00000578240 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
CTC1-203ENST00000578240 APBA3O96018 575 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 GNAI2P04899 355 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 IL6STP40189 918 aaPredicted RBP16.46■□□□□ 0.23
CTC1-203ENST00000578240 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 COL15A1P39059 1388 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 CNTNAP4Q9C0A0 1308 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
CTC1-203ENST00000578240 GCKRQ14397 625 aa16.46■□□□□ 0.23
CTC1-203ENST00000578240 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
CTC1-203ENST00000578240 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
CTC1-203ENST00000578240 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
CTC1-203ENST00000578240 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
CTC1-203ENST00000578240 GRM8O00222 908 aa16.45■□□□□ 0.22
CTC1-203ENST00000578240 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
CTC1-203ENST00000578240 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
CTC1-203ENST00000578240 CASP7P55210 303 aa16.44■□□□□ 0.22
CTC1-203ENST00000578240 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
CTC1-203ENST00000578240 NEXNQ0ZGT2 675 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
CTC1-203ENST00000578240 HLFQ16534 295 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
CTC1-203ENST00000578240 CCNL1Q9UK58 526 aaPredicted RBP16.43■□□□□ 0.22
CTC1-203ENST00000578240 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
CTC1-203ENST00000578240 A0A1B0GUL6 1792 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 PDE4AP27815 886 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 MTX1Q13505 466 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
CTC1-203ENST00000578240 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
CTC1-203ENST00000578240 DCTPP1Q9H773 170 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 C9orf78Q9NZ63 289 aaPredicted RBP16.41■□□□□ 0.22
CTC1-203ENST00000578240 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 QSER1Q2KHR3 1735 aa16.41■□□□□ 0.22
CTC1-203ENST00000578240 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 POLA2Q14181 598 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 EPHA10Q5JZY3 1008 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 SSH3Q8TE77 659 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 TBC1D2BQ9UPU7 963 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 NUCB1Q02818 461 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 SMIM5Q71RC9 77 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
CTC1-203ENST00000578240 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
CTC1-203ENST00000578240 UBN2Q6ZU65 1347 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms