RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CD2BP2O95400 341 aaKnown RBP12.82□□□□□ -0.36
USP43-205ENST00000574408 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
USP43-205ENST00000574408 AOX1Q06278 1338 aa12.82□□□□□ -0.36
USP43-205ENST00000574408 UTYO14607 1347 aa12.81□□□□□ -0.36
USP43-205ENST00000574408 GCKRQ14397 625 aa12.81□□□□□ -0.36
USP43-205ENST00000574408 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
USP43-205ENST00000574408 UNC5CLQ8IV45 518 aa12.81□□□□□ -0.36
USP43-205ENST00000574408 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
USP43-205ENST00000574408 RABEP1Q15276 862 aa12.8□□□□□ -0.36
USP43-205ENST00000574408 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
USP43-205ENST00000574408 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 CHMLP26374 656 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
USP43-205ENST00000574408 ESYT1Q9BSJ8 1104 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
USP43-205ENST00000574408 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
USP43-205ENST00000574408 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 PI4K2BQ8TCG2 481 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
USP43-205ENST00000574408 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 GLI3P10071 1580 aa12.79□□□□□ -0.36
USP43-205ENST00000574408 A1BGP04217 495 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP43-205ENST00000574408 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 SIL1Q9H173 461 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 GSE1Q14687 1217 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 UBE3BQ7Z3V4 1068 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
USP43-205ENST00000574408 ANO2Q9NQ90 1003 aa12.77□□□□□ -0.36
USP43-205ENST00000574408 TUBGCP6Q96RT7 1819 aa12.77□□□□□ -0.37
USP43-205ENST00000574408 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
USP43-205ENST00000574408 TTLL7Q6ZT98 887 aa12.77□□□□□ -0.37
USP43-205ENST00000574408 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
USP43-205ENST00000574408 AACSQ86V21 672 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 A0A087WZG4 1122 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 CNTROBQ8N137 903 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 TTC41PQ6P2S7 1318 aa12.76□□□□□ -0.37
USP43-205ENST00000574408 GLRX3O76003 335 aaKnown RBP12.75□□□□□ -0.37
USP43-205ENST00000574408 SASH1O94885 1247 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 ECHDC1Q9NTX5 307 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 USP42Q9H9J4 1324 aaKnown RBP12.75□□□□□ -0.37
USP43-205ENST00000574408 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 TNS2Q63HR2 1409 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
USP43-205ENST00000574408 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
USP43-205ENST00000574408 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
USP43-205ENST00000574408 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 MCCP23508 829 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 PIGBQ92521 554 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 IL25Q9H293 177 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 ST18O60284 1047 aa12.74□□□□□ -0.37
USP43-205ENST00000574408 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
USP43-205ENST00000574408 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
USP43-205ENST00000574408 CCDC8Q9H0W5 538 aaPredicted RBP12.74□□□□□ -0.37
USP43-205ENST00000574408 DDIT3P35638 169 aa12.73□□□□□ -0.37
USP43-205ENST00000574408 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
USP43-205ENST00000574408 AFDNP55196 1824 aaKnown RBP12.73□□□□□ -0.37
USP43-205ENST00000574408 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
USP43-205ENST00000574408 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 PAPPAQ13219 1627 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 COL14A1Q05707 1796 aaKnown RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 CWC25Q9NXE8 425 aaPredicted RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 TLR7Q9NYK1 1049 aaKnown RBP12.72□□□□□ -0.37
USP43-205ENST00000574408 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
USP43-205ENST00000574408 DISP2A7MBM2 1401 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 CASP7P55210 303 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 EXOC5O00471 708 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 SGSM2O43147 1006 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.37
USP43-205ENST00000574408 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
USP43-205ENST00000574408 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 CWC27Q6UX04 472 aaKnown RBP12.71□□□□□ -0.37
USP43-205ENST00000574408 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
USP43-205ENST00000574408 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
USP43-205ENST00000574408 MCM4P33991 863 aa12.71□□□□□ -0.38
USP43-205ENST00000574408 NEK4P51957 841 aa12.71□□□□□ -0.38
USP43-205ENST00000574408 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.38
USP43-205ENST00000574408 H7C1W4 665 aa12.7□□□□□ -0.38
USP43-205ENST00000574408 COL15A1P39059 1388 aa12.7□□□□□ -0.38
USP43-205ENST00000574408 ARID3AQ99856 593 aa12.7□□□□□ -0.38
USP43-205ENST00000574408 TEX13AQ9BXU3 409 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms