RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 IMPG2Q9BZV3 1241 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 ATP2B3Q16720 1220 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 BRDTQ58F21 947 aaPredicted RBP10.91□□□□□ -0.66
USP6-204ENST00000572949 SPOUT1Q5T280 376 aaKnown RBP10.91□□□□□ -0.66
USP6-204ENST00000572949 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
USP6-204ENST00000572949 ANKRD50Q9ULJ7 1429 aa10.91□□□□□ -0.66
USP6-204ENST00000572949 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 TTF1Q15361 905 aaPredicted RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 BOLA2Q9H3K6 86 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 USO1O60763 962 aaKnown RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 NUDT16Q96DE0 195 aaKnown RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 IDEP14735 1019 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 TBC1D5Q92609 795 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 CRNKL1Q9BZJ0 848 aaKnown RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 PRPF31Q8WWY3 499 aaKnown RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 C8orf76Q96K31 380 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 MTIF2P46199 727 aaKnown RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 CCDC152Q4G0S7 254 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 APBB1IPQ7Z5R6 666 aaPredicted RBP10.9□□□□□ -0.66
USP6-204ENST00000572949 ACSBG1Q96GR2 724 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 MIS18AQ9NYP9 233 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
USP6-204ENST00000572949 TSPY3P0CV98 308 aa10.9□□□□□ -0.67
USP6-204ENST00000572949 TSPY8P0CW00 308 aa10.9□□□□□ -0.67
USP6-204ENST00000572949 USHBP1Q8N6Y0 703 aa10.9□□□□□ -0.67
USP6-204ENST00000572949 ZNF644Q9H582 1327 aaPredicted RBP10.89□□□□□ -0.67
USP6-204ENST00000572949 SPECC1Q5M775 1068 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 NUP88Q99567 741 aaPredicted RBP10.89□□□□□ -0.67
USP6-204ENST00000572949 NUP62CLQ9H1M0 184 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 MSH6P52701 1360 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 CCDC175P0C221 793 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 TNNI2P48788 182 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 SERPINA10Q9UK55 444 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
USP6-204ENST00000572949 PICALMQ13492 652 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 HAUS7Q99871 368 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
USP6-204ENST00000572949 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 KRT28Q7Z3Y7 464 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 ZBTB3Q9H5J0 574 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 HYPKQ9NX55 129 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 PDIA4P13667 645 aaKnown RBP10.88□□□□□ -0.67
USP6-204ENST00000572949 SIRT1Q96EB6 747 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 PRG4Q92954 1404 aaPredicted RBP10.88□□□□□ -0.67
USP6-204ENST00000572949 GOLGA8AA7E2F4 631 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 GOLGA8BA8MQT2 603 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 FILIP1Q7Z7B0 1213 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
USP6-204ENST00000572949 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 TAF7Q15545 349 aaPredicted RBP10.88□□□□□ -0.67
USP6-204ENST00000572949 CFAP57Q96MR6 1250 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 LRRC27Q9C0I9 530 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 MAP9Q49MG5 647 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
USP6-204ENST00000572949 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 KIF5CO60282 957 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 HMGB1P09429 215 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 ZC3H12CQ9C0D7 883 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 MTERF4Q7Z6M4 381 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 PLVAPQ9BX97 442 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 TTC12Q9H892 705 aaPredicted RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 PICK1Q9NRD5 415 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 GAS8O95995 478 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 UBA7P41226 1012 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 BMS1Q14692 1282 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 MFSD6Q6ZSS7 791 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 ZNF804AQ7Z570 1209 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 CWC25Q9NXE8 425 aaPredicted RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 TRAK2O60296 914 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 MRE11P49959 708 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 MVPQ14764 893 aaKnown RBP10.87□□□□□ -0.67
USP6-204ENST00000572949 CCDC14Q49A88 953 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 CCDC144CPQ8IYA2 1237 aa10.87□□□□□ -0.67
USP6-204ENST00000572949 ATAD2Q6PL18 1390 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 KRT13P13646 458 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 ERBINQ96RT1 1412 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 TMEM67Q5HYA8 995 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 NACA2Q9H009 215 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 HLTFQ14527 1009 aaKnown RBP eCLIP10.86□□□□□ -0.67
USP6-204ENST00000572949 TMCO3Q6UWJ1 677 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 IVNS1ABPQ9Y6Y0 642 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 SMARCC2Q8TAQ2 1214 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 PSMC4P43686 418 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms