RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 FAM98CQ17RN3 349 aaKnown RBP24.09■■□□□ 1.45
RPAIN-210ENST00000571613 DNAJC10Q8IXB1 793 aa24.08■■□□□ 1.45
RPAIN-210ENST00000571613 LRRCC1Q9C099 1032 aa24.08■■□□□ 1.45
RPAIN-210ENST00000571613 SRGAP3O43295 1099 aa24.08■■□□□ 1.44
RPAIN-210ENST00000571613 PIP4K2AP48426 406 aaPredicted RBP24.08■■□□□ 1.44
RPAIN-210ENST00000571613 SMARCC1Q92922 1105 aaPredicted RBP24.08■■□□□ 1.44
RPAIN-210ENST00000571613 DOT1LQ8TEK3 1739 aa24.07■■□□□ 1.44
RPAIN-210ENST00000571613 EIF5BO60841 1220 aaKnown RBP24.07■■□□□ 1.44
RPAIN-210ENST00000571613 COL15A1P39059 1388 aa24.06■■□□□ 1.44
RPAIN-210ENST00000571613 UPF2Q9HAU5 1272 aaKnown RBP24.06■■□□□ 1.44
RPAIN-210ENST00000571613 PLEKHM2Q8IWE5 1019 aa24.05■■□□□ 1.44
RPAIN-210ENST00000571613 EXOC6BQ9Y2D4 811 aa24.05■■□□□ 1.44
RPAIN-210ENST00000571613 KIF6Q6ZMV9 814 aa24.04■■□□□ 1.44
RPAIN-210ENST00000571613 KAT6BQ8WYB5 2073 aa24.04■■□□□ 1.44
RPAIN-210ENST00000571613 ARFGEF2Q9Y6D5 1785 aa24.04■■□□□ 1.44
RPAIN-210ENST00000571613 CYP19A1P11511 503 aaPredicted RBP24.03■■□□□ 1.44
RPAIN-210ENST00000571613 TTLL7Q6ZT98 887 aa24.03■■□□□ 1.44
RPAIN-210ENST00000571613 NOP58Q9Y2X3 529 aaKnown RBP24.03■■□□□ 1.44
RPAIN-210ENST00000571613 SURF6O75683 361 aaKnown RBP24.02■■□□□ 1.44
RPAIN-210ENST00000571613 NPM2Q86SE8 214 aaKnown RBP24.02■■□□□ 1.44
RPAIN-210ENST00000571613 CCDC191Q8NCU4 936 aa24.02■■□□□ 1.44
RPAIN-210ENST00000571613 KIF1BPQ96EK5 621 aa24.02■■□□□ 1.44
RPAIN-210ENST00000571613 ACSBG1Q96GR2 724 aa24.02■■□□□ 1.44
RPAIN-210ENST00000571613 SUCLG2Q96I99 432 aa24.02■■□□□ 1.44
RPAIN-210ENST00000571613 OSBPL3Q9H4L5 887 aa24.02■■□□□ 1.44
RPAIN-210ENST00000571613 APBB1O00213 710 aa24.01■■□□□ 1.43
RPAIN-210ENST00000571613 ERC1Q8IUD2 1116 aa24.01■■□□□ 1.43
RPAIN-210ENST00000571613 GJD4Q96KN9 370 aaPredicted RBP24.01■■□□□ 1.43
RPAIN-210ENST00000571613 CWC25Q9NXE8 425 aaPredicted RBP24.01■■□□□ 1.43
RPAIN-210ENST00000571613 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
RPAIN-210ENST00000571613 A0A0G2JS52 829 aa24■■□□□ 1.43
RPAIN-210ENST00000571613 MYT1Q01538 1121 aa24■■□□□ 1.43
RPAIN-210ENST00000571613 SLC4A9Q96Q91 983 aa24■■□□□ 1.43
RPAIN-210ENST00000571613 A0A087WZG4 1122 aa23.99■■□□□ 1.43
RPAIN-210ENST00000571613 SMARCA5O60264 1052 aaPredicted RBP23.99■■□□□ 1.43
RPAIN-210ENST00000571613 IL6STP40189 918 aaPredicted RBP23.99■■□□□ 1.43
RPAIN-210ENST00000571613 TRIM28Q13263 835 aaKnown RBP23.99■■□□□ 1.43
RPAIN-210ENST00000571613 HSP90AB3PQ58FF7 597 aa23.99■■□□□ 1.43
RPAIN-210ENST00000571613 AFF2P51816 1311 aa23.99■■□□□ 1.43
RPAIN-210ENST00000571613 TTC22Q5TAA0 569 aa23.99■■□□□ 1.43
RPAIN-210ENST00000571613 BICC1Q9H694 974 aaKnown RBP23.99■■□□□ 1.43
RPAIN-210ENST00000571613 ATP5J2-PTCD1G3V325 749 aa23.98■■□□□ 1.43
RPAIN-210ENST00000571613 TCIRG1Q13488 830 aa23.98■■□□□ 1.43
RPAIN-210ENST00000571613 DDRGK1Q96HY6 314 aa23.98■■□□□ 1.43
RPAIN-210ENST00000571613 ZBTB3Q9H5J0 574 aa23.98■■□□□ 1.43
RPAIN-210ENST00000571613 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 THSD7AQ9UPZ6 1657 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 LOC102724428A0A0B4J2F2 783 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 SIK1P57059 783 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 C16orf71Q8IYS4 520 aaPredicted RBP23.97■■□□□ 1.43
RPAIN-210ENST00000571613 KAZALD1Q96I82 304 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 MAP3K15Q6ZN16 1313 aa23.97■■□□□ 1.43
RPAIN-210ENST00000571613 PALLDQ8WX93 1383 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 H7C1W4 665 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 ATP6V1AP38606 617 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 RHPN1Q8TCX5 695 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 IPO9Q96P70 1041 aaKnown RBP23.96■■□□□ 1.43
RPAIN-210ENST00000571613 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 ATRNO75882 1429 aa23.96■■□□□ 1.43
RPAIN-210ENST00000571613 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
RPAIN-210ENST00000571613 CICQ96RK0 1608 aaPredicted RBP23.96■■□□□ 1.43
RPAIN-210ENST00000571613 ONECUT3O60422 494 aaPredicted RBP23.95■■□□□ 1.43
RPAIN-210ENST00000571613 AOX1Q06278 1338 aa23.95■■□□□ 1.42
RPAIN-210ENST00000571613 ERVV-1B6SEH8 477 aa23.95■■□□□ 1.42
RPAIN-210ENST00000571613 PDE1AP54750 535 aa23.95■■□□□ 1.42
RPAIN-210ENST00000571613 OS9Q13438 667 aaPredicted RBP23.95■■□□□ 1.42
RPAIN-210ENST00000571613 RABL6Q3YEC7 729 aaPredicted RBP23.95■■□□□ 1.42
RPAIN-210ENST00000571613 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
RPAIN-210ENST00000571613 ZNF330Q9Y3S2 320 aaPredicted RBP23.95■■□□□ 1.42
RPAIN-210ENST00000571613 GIGYF2Q6Y7W6 1299 aaKnown RBP23.94■■□□□ 1.42
RPAIN-210ENST00000571613 STAP2Q9UGK3 403 aa23.94■■□□□ 1.42
RPAIN-210ENST00000571613 TJP1Q07157 1748 aa23.93■■□□□ 1.42
RPAIN-210ENST00000571613 CASP7P55210 303 aa23.93■■□□□ 1.42
RPAIN-210ENST00000571613 G3BP1Q13283 466 aaKnown RBP eCLIP23.93■■□□□ 1.42
RPAIN-210ENST00000571613 CCDC87Q9NVE4 849 aa23.93■■□□□ 1.42
RPAIN-210ENST00000571613 ZBTB1Q9Y2K1 713 aa23.93■■□□□ 1.42
RPAIN-210ENST00000571613 SALL3Q9BXA9 1300 aa23.93■■□□□ 1.42
RPAIN-210ENST00000571613 CDC45O75419 566 aa23.92■■□□□ 1.42
RPAIN-210ENST00000571613 MX1P20591 662 aa23.92■■□□□ 1.42
RPAIN-210ENST00000571613 GSPT1P15170 499 aaKnown RBP23.91■■□□□ 1.42
RPAIN-210ENST00000571613 CASC1Q6TDU7 716 aa23.91■■□□□ 1.42
RPAIN-210ENST00000571613 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
RPAIN-210ENST00000571613 OTUD7AQ8TE49 926 aaPredicted RBP23.91■■□□□ 1.42
RPAIN-210ENST00000571613 ZNF831Q5JPB2 1677 aa23.91■■□□□ 1.42
RPAIN-210ENST00000571613 SEC24BO95487 1268 aa23.9■■□□□ 1.42
RPAIN-210ENST00000571613 COPRSQ9NQ92 184 aa23.9■■□□□ 1.42
RPAIN-210ENST00000571613 KCNQ2O43526 872 aa23.89■■□□□ 1.42
RPAIN-210ENST00000571613 EIF5P55010 431 aaKnown RBP23.89■■□□□ 1.42
RPAIN-210ENST00000571613 ARXQ96QS3 562 aa23.89■■□□□ 1.42
RPAIN-210ENST00000571613 BCL11AQ9H165 835 aa23.89■■□□□ 1.42
RPAIN-210ENST00000571613 CRKLP46109 303 aaKnown RBP23.89■■□□□ 1.41
RPAIN-210ENST00000571613 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.41
RPAIN-210ENST00000571613 PCCAP05165 728 aaPredicted RBP23.88■■□□□ 1.41
RPAIN-210ENST00000571613 EPHA10Q5JZY3 1008 aa23.88■■□□□ 1.41
RPAIN-210ENST00000571613 INTS5Q6P9B9 1019 aaKnown RBP23.88■■□□□ 1.41
RPAIN-210ENST00000571613 TBC1D32Q96NH3 1257 aa23.87■■□□□ 1.41
RPAIN-210ENST00000571613 IL1RAPL2Q9NP60 686 aa23.87■■□□□ 1.41
RPAIN-210ENST00000571613 ZBTB38Q8NAP3 1195 aaPredicted RBP23.86■■□□□ 1.41
RPAIN-210ENST00000571613 GPATCH3Q96I76 525 aa23.86■■□□□ 1.41
RPAIN-210ENST00000571613 QTRT2Q9H974 415 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms