RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 BCL11AQ9H165 835 aa13.65□□□□□ -0.22
PDXDC1-216ENST00000569715 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.23
PDXDC1-216ENST00000569715 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.23
PDXDC1-216ENST00000569715 HMMRO75330 724 aa13.64□□□□□ -0.23
PDXDC1-216ENST00000569715 PTF1AQ7RTS3 328 aa13.64□□□□□ -0.23
PDXDC1-216ENST00000569715 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
PDXDC1-216ENST00000569715 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
PDXDC1-216ENST00000569715 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
PDXDC1-216ENST00000569715 GRM8O00222 908 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 CYP19A1P11511 503 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 TEX13AQ9BXU3 409 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 EP400Q96L91 3159 aa13.63□□□□□ -0.23
PDXDC1-216ENST00000569715 STARD3NLO95772 234 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 GCKRQ14397 625 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 KAZALD1Q96I82 304 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 UTYO14607 1347 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
PDXDC1-216ENST00000569715 C16orf71Q8IYS4 520 aaPredicted RBP13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 SSH3Q8TE77 659 aa13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 BTAF1O14981 1849 aa13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 TRPC5Q9UL62 973 aaPredicted RBP13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 POLA2Q14181 598 aa13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 MYH14Q7Z406 1995 aaKnown RBP13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 CICQ96RK0 1608 aaPredicted RBP13.61□□□□□ -0.23
PDXDC1-216ENST00000569715 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 SIK1P57059 783 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 ITPK1Q13572 414 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 ATP6V1AP38606 617 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
PDXDC1-216ENST00000569715 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 QTRT2Q9H974 415 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 RREB1Q92766 1687 aa13.59□□□□□ -0.23
PDXDC1-216ENST00000569715 KCNQ4P56696 695 aa13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 MTX1Q13505 466 aa13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 ARXQ96QS3 562 aa13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 ONECUT3O60422 494 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 BRWD3Q6RI45 1802 aa13.58□□□□□ -0.24
PDXDC1-216ENST00000569715 A0A087WZG4 1122 aa13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 CRKLP46109 303 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 NUP98P52948 1817 aa13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 SEC24BO95487 1268 aa13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 CASP7P55210 303 aa13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
PDXDC1-216ENST00000569715 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 HLFQ16534 295 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 PA2G4Q9UQ80 394 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 MAP3K15Q6ZN16 1313 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
PDXDC1-216ENST00000569715 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 IL6STP40189 918 aaPredicted RBP13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 IL1RAPL2Q9NP60 686 aa13.55□□□□□ -0.24
PDXDC1-216ENST00000569715 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 H7C1W4 665 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
PDXDC1-216ENST00000569715 GIGYF2Q6Y7W6 1299 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 GPTP24298 496 aa13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 COL15A1P39059 1388 aa13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 LY75O60449 1722 aa13.53□□□□□ -0.24
PDXDC1-216ENST00000569715 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.24
PDXDC1-216ENST00000569715 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.24
PDXDC1-216ENST00000569715 TTC22Q5TAA0 569 aa13.52□□□□□ -0.25
PDXDC1-216ENST00000569715 FOXO4P98177 505 aa13.52□□□□□ -0.25
PDXDC1-216ENST00000569715 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms