RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 FAM98CQ17RN3 349 aaKnown RBP13.52□□□□□ -0.25
VPS9D1-206ENST00000567379 MARCH10Q8NA82 808 aaPredicted RBP13.52□□□□□ -0.25
VPS9D1-206ENST00000567379 NBPF26B4DH59 902 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 A1BGP04217 495 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 NBPF14Q5TI25 921 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 NBPF15Q8N660 670 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 MYD88Q99836 296 aa13.51□□□□□ -0.25
VPS9D1-206ENST00000567379 A0A0G2JS52 829 aa13.5□□□□□ -0.25
VPS9D1-206ENST00000567379 CWF19L2Q2TBE0 894 aaKnown RBP13.5□□□□□ -0.25
VPS9D1-206ENST00000567379 DNAJC10Q8IXB1 793 aa13.5□□□□□ -0.25
VPS9D1-206ENST00000567379 GJD4Q96KN9 370 aaPredicted RBP13.5□□□□□ -0.25
VPS9D1-206ENST00000567379 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
VPS9D1-206ENST00000567379 UTYO14607 1347 aa13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 GRM8O00222 908 aa13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 MYT1Q01538 1121 aa13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 C8orf34Q49A92 452 aa13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
VPS9D1-206ENST00000567379 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 PPP1R42Q7Z4L9 355 aa13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 SSH3Q8TE77 659 aa13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
VPS9D1-206ENST00000567379 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
VPS9D1-206ENST00000567379 BAG6P46379 1132 aa13.47□□□□□ -0.25
VPS9D1-206ENST00000567379 POLA2Q14181 598 aa13.47□□□□□ -0.25
VPS9D1-206ENST00000567379 GCKRQ14397 625 aa13.47□□□□□ -0.25
VPS9D1-206ENST00000567379 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
VPS9D1-206ENST00000567379 APBB1O00213 710 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 SRGAP3O43295 1099 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 RAB11FIP3O75154 756 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 MTX1Q13505 466 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 HSP90AB4PQ58FF6 505 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
VPS9D1-206ENST00000567379 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.26
VPS9D1-206ENST00000567379 CYP19A1P11511 503 aaPredicted RBP13.45□□□□□ -0.26
VPS9D1-206ENST00000567379 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
VPS9D1-206ENST00000567379 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
VPS9D1-206ENST00000567379 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
VPS9D1-206ENST00000567379 TJP1Q07157 1748 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 SUCLG2Q96I99 432 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-206ENST00000567379 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 PLEKHM2Q8IWE5 1019 aa13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 CCDC191Q8NCU4 936 aa13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 COL15A1P39059 1388 aa13.43□□□□□ -0.26
VPS9D1-206ENST00000567379 A0A087WZG4 1122 aa13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 LOC102724428A0A0B4J2F2 783 aa13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 SIK1P57059 783 aa13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 BICC1Q9H694 974 aaKnown RBP13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 PALLDQ8WX93 1383 aa13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-206ENST00000567379 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 H7C1W4 665 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 HSP90AB3PQ58FF7 597 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 C16orf71Q8IYS4 520 aaPredicted RBP13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 ARXQ96QS3 562 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 ZBTB1Q9Y2K1 713 aa13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
VPS9D1-206ENST00000567379 KCNQ2O43526 872 aa13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 KAZALD1Q96I82 304 aa13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
VPS9D1-206ENST00000567379 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-206ENST00000567379 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-206ENST00000567379 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-206ENST00000567379 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
VPS9D1-206ENST00000567379 OSBPL3Q9H4L5 887 aa13.39□□□□□ -0.27
VPS9D1-206ENST00000567379 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 ERVV-1B6SEH8 477 aa13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 CASP7P55210 303 aa13.38□□□□□ -0.27
VPS9D1-206ENST00000567379 G3BP1Q13283 466 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms