RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 METTL22Q9BUU2 404 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 IL1RAPL2Q9NP60 686 aa13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 THRAP3Q9Y2W1 955 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-211ENST00000560433 GRM8O00222 908 aa13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 MEX3CQ5U5Q3 659 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 KAZALD1Q96I82 304 aa13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 BCL9O00512 1426 aa13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-211ENST00000560433 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 PAPPAQ13219 1627 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 KCNQ4P56696 695 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 GCKRQ14397 625 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
SNRPA1-211ENST00000560433 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 LAMB4A4D0S4 1761 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 BARGINQ6ZT62 677 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
SNRPA1-211ENST00000560433 A0A087WZG4 1122 aa13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 POLA2Q14181 598 aa13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 VPS72Q15906 364 aa13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
SNRPA1-211ENST00000560433 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
SNRPA1-211ENST00000560433 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
SNRPA1-211ENST00000560433 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
SNRPA1-211ENST00000560433 SIL1Q9H173 461 aa13.47□□□□□ -0.25
SNRPA1-211ENST00000560433 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
SNRPA1-211ENST00000560433 ARFGEF2Q9Y6D5 1785 aa13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 STARD3NLO95772 234 aa13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 OS9Q13438 667 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 BMP2KLQ5H9B9 411 aa13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.46□□□□□ -0.25
SNRPA1-211ENST00000560433 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 SPATA31A6Q5VVP1 1343 aa13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 HLFQ16534 295 aa13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 AFF2P51816 1311 aa13.45□□□□□ -0.26
SNRPA1-211ENST00000560433 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 VSIG10Q8N0Z9 540 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 RHPN1Q8TCX5 695 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 ERBB4Q15303 1308 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 GPTP24298 496 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 PDE1AP54750 535 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 UTYO14607 1347 aa13.44□□□□□ -0.26
SNRPA1-211ENST00000560433 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 SDSP20132 328 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 SIK1P57059 783 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 ITPK1Q13572 414 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 TEX13AQ9BXU3 409 aaPredicted RBP13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
SNRPA1-211ENST00000560433 MX1P20591 662 aa13.42□□□□□ -0.26
SNRPA1-211ENST00000560433 MTX1Q13505 466 aa13.42□□□□□ -0.26
SNRPA1-211ENST00000560433 GJD4Q96KN9 370 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-211ENST00000560433 CWC25Q9NXE8 425 aaPredicted RBP13.42□□□□□ -0.26
SNRPA1-211ENST00000560433 KIF6Q6ZMV9 814 aa13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 PALLDQ8WX93 1383 aa13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 CASP7P55210 303 aa13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
SNRPA1-211ENST00000560433 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 CRKLP46109 303 aaKnown RBP13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 NUP188Q5SRE5 1749 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 SASH1O94885 1247 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 TCIRG1Q13488 830 aa13.4□□□□□ -0.26
SNRPA1-211ENST00000560433 H7C1W4 665 aa13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 RAB11FIP3O75154 756 aa13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
SNRPA1-211ENST00000560433 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms