RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-208ENST00000560371 ECHDC1Q9NTX5 307 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 CCDC194A0A1B0GVG4 234 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
TRAF3-208ENST00000560371 SNRKQ9NRH2 765 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 CIZ1Q9ULV3 898 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-208ENST00000560371 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 GOLGA8BA8MQT2 603 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-208ENST00000560371 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
TRAF3-208ENST00000560371 UBA5Q9GZZ9 404 aa15.66■□□□□ 0.1
TRAF3-208ENST00000560371 FBLN1P23142 703 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 SYCP2Q9BX26 1530 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 GUCY1B3Q02153 619 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 C19orf44Q9H6X5 657 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 ANXA1P04083 346 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 CCDC12Q8WUD4 166 aaPredicted RBP15.65■□□□□ 0.1
TRAF3-208ENST00000560371 MAP3K11Q16584 847 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 ATP10BO94823 1461 aa15.65■□□□□ 0.1
TRAF3-208ENST00000560371 PLCH2O75038 1416 aa15.64■□□□□ 0.1
TRAF3-208ENST00000560371 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 AXDND1Q5T1B0 1012 aaPredicted RBP15.64■□□□□ 0.09
TRAF3-208ENST00000560371 VAT1LQ9HCJ6 419 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 ZRSR2Q15696 482 aaKnown RBP15.64■□□□□ 0.09
TRAF3-208ENST00000560371 MFSD6Q6ZSS7 791 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 KIAA1328Q86T90 577 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 PEG3Q9GZU2 1588 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 SLC4A8Q2Y0W8 1093 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 ZGPATQ8N5A5 531 aaKnown RBP15.64■□□□□ 0.09
TRAF3-208ENST00000560371 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
TRAF3-208ENST00000560371 MBIPQ9NS73 344 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 STX8Q9UNK0 236 aa15.64■□□□□ 0.09
TRAF3-208ENST00000560371 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 TSG101Q99816 390 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 EPB41L2O43491 1005 aaKnown RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CCT2P78371 535 aaKnown RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CRNKL1Q9BZJ0 848 aaKnown RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 GSTO1P78417 241 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 FILIP1Q7Z7B0 1213 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 KAT14Q9H8E8 782 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 FGFR1OPO95684 399 aaKnown RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CABLES1Q8TDN4 633 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 PLCD4Q9BRC7 762 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CETN2P41208 172 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 CCDC150Q8NCX0 1101 aa15.63■□□□□ 0.09
TRAF3-208ENST00000560371 SCAND2PQ9GZW5 306 aaPredicted RBP15.63■□□□□ 0.09
TRAF3-208ENST00000560371 NIP7Q9Y221 180 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAF3-208ENST00000560371 ANKRD62A6NC57 917 aa15.62■□□□□ 0.09
TRAF3-208ENST00000560371 COPS6Q7L5N1 327 aa15.62■□□□□ 0.09
TRAF3-208ENST00000560371 IL2RBP14784 551 aa15.62■□□□□ 0.09
TRAF3-208ENST00000560371 UQCRFS1P1P0C7P4 283 aa15.62■□□□□ 0.09
TRAF3-208ENST00000560371 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
TRAF3-208ENST00000560371 RTCBQ9Y3I0 505 aaKnown RBP15.62■□□□□ 0.09
TRAF3-208ENST00000560371 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 MPHOSPH6Q99547 160 aaKnown RBP15.61■□□□□ 0.09
TRAF3-208ENST00000560371 SAMM50Q9Y512 469 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 TRMT1LQ7Z2T5 733 aaKnown RBP15.61■□□□□ 0.09
TRAF3-208ENST00000560371 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 LIMCH1Q9UPQ0 1083 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 HDAC9Q9UKV0 1011 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
TRAF3-208ENST00000560371 TCP11L1Q9NUJ3 509 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 MPNDQ8N594 471 aa15.61■□□□□ 0.09
TRAF3-208ENST00000560371 HSPA2P54652 639 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 HAND2P61296 217 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 LMTK3Q96Q04 1460 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 FKBP15Q5T1M5 1219 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 CAMK4Q16566 473 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 GRM8O00222 908 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 AKAP4Q5JQC9 854 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
TRAF3-208ENST00000560371 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
TRAF3-208ENST00000560371 EIF4G3O43432 1585 aaKnown RBP15.6■□□□□ 0.09
TRAF3-208ENST00000560371 IL16Q14005 1332 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 VPS36Q86VN1 386 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 IARSP41252 1262 aaKnown RBP15.59■□□□□ 0.09
TRAF3-208ENST00000560371 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 KIF20AO95235 890 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
TRAF3-208ENST00000560371 H0YHG0 523 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms