RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
CARMIL3-203ENST00000560349 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
CARMIL3-203ENST00000560349 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
CARMIL3-203ENST00000560349 PARP4Q9UKK3 1724 aaKnown RBP17.32■□□□□ 0.36
CARMIL3-203ENST00000560349 RTN4Q9NQC3 1192 aaKnown RBP17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 NUTM2BA6NNL0 878 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 NUTM2EB1AL46 878 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 SYTL4Q96C24 671 aaPredicted RBP17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 OSBPL3Q9H4L5 887 aa17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 ASAP1Q9ULH1 1129 aa17.31■□□□□ 0.36
CARMIL3-203ENST00000560349 GCKRQ14397 625 aa17.3■□□□□ 0.36
CARMIL3-203ENST00000560349 HSCBQ8IWL3 235 aa17.3■□□□□ 0.36
CARMIL3-203ENST00000560349 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
CARMIL3-203ENST00000560349 UBE3BQ7Z3V4 1068 aa17.3■□□□□ 0.36
CARMIL3-203ENST00000560349 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
CARMIL3-203ENST00000560349 GLI3P10071 1580 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 KIF1BPQ96EK5 621 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 ARXQ96QS3 562 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 ERVV-2B6SEH9 535 aa17.29■□□□□ 0.36
CARMIL3-203ENST00000560349 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 IL25Q9H293 177 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 BRPF3Q9ULD4 1205 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 SHANK3Q9BYB0 1731 aa17.28■□□□□ 0.36
CARMIL3-203ENST00000560349 PIGBQ92521 554 aa17.27■□□□□ 0.36
CARMIL3-203ENST00000560349 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.35
CARMIL3-203ENST00000560349 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
CARMIL3-203ENST00000560349 A0A087WZG4 1122 aa17.26■□□□□ 0.35
CARMIL3-203ENST00000560349 MTX1Q13505 466 aa17.26■□□□□ 0.35
CARMIL3-203ENST00000560349 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
CARMIL3-203ENST00000560349 KCPQ6ZWJ8 1503 aa17.25■□□□□ 0.35
CARMIL3-203ENST00000560349 ERC2O15083 957 aa17.25■□□□□ 0.35
CARMIL3-203ENST00000560349 TLR7Q9NYK1 1049 aaKnown RBP17.25■□□□□ 0.35
CARMIL3-203ENST00000560349 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
CARMIL3-203ENST00000560349 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
CARMIL3-203ENST00000560349 DNAJC10Q8IXB1 793 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 CCDC8Q9H0W5 538 aaPredicted RBP17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 SASH1O94885 1247 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 CHMLP26374 656 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 AACSQ86V21 672 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
CARMIL3-203ENST00000560349 UTYO14607 1347 aa17.23■□□□□ 0.35
CARMIL3-203ENST00000560349 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
CARMIL3-203ENST00000560349 ESYT1Q9BSJ8 1104 aa17.23■□□□□ 0.35
CARMIL3-203ENST00000560349 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
CARMIL3-203ENST00000560349 PLBD2Q8NHP8 589 aa17.23■□□□□ 0.35
CARMIL3-203ENST00000560349 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
CARMIL3-203ENST00000560349 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
CARMIL3-203ENST00000560349 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
CARMIL3-203ENST00000560349 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
CARMIL3-203ENST00000560349 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 REC8O95072 547 aa17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 PALD1Q9ULE6 856 aa17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 COL16A1Q07092 1604 aaPredicted RBP17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 ACSBG1Q96GR2 724 aa17.21■□□□□ 0.35
CARMIL3-203ENST00000560349 ARFGEF2Q9Y6D5 1785 aa17.2■□□□□ 0.34
CARMIL3-203ENST00000560349 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
CARMIL3-203ENST00000560349 EXOC5O00471 708 aa17.2■□□□□ 0.34
CARMIL3-203ENST00000560349 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
CARMIL3-203ENST00000560349 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 TUBGCP6Q96RT7 1819 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 SNX21Q969T3 373 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 NDUFB9Q9Y6M9 179 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 NOL8Q76FK4 1167 aaKnown RBP17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
CARMIL3-203ENST00000560349 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
CARMIL3-203ENST00000560349 K7ELQ4 463 aaPredicted RBP17.18■□□□□ 0.34
CARMIL3-203ENST00000560349 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
CARMIL3-203ENST00000560349 DISP2A7MBM2 1401 aa17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 CASP7P55210 303 aa17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 ECHDC1Q9NTX5 307 aa17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 AHDC1Q5TGY3 1603 aaPredicted RBP17.17■□□□□ 0.34
CARMIL3-203ENST00000560349 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 GPTP24298 496 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 TFCP2Q12800 502 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 ZNF594Q96JF6 807 aaPredicted RBP17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 CWC25Q9NXE8 425 aaPredicted RBP17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 AOX1Q06278 1338 aa17.16■□□□□ 0.34
CARMIL3-203ENST00000560349 PAPPAQ13219 1627 aa17.15■□□□□ 0.34
CARMIL3-203ENST00000560349 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
CARMIL3-203ENST00000560349 RABEP1Q15276 862 aa17.15■□□□□ 0.34
CARMIL3-203ENST00000560349 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
CARMIL3-203ENST00000560349 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms