RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 CDCA7Q9BWT1 371 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-207ENST00000559598 RGS17Q9UGC6 210 aaPredicted RBP9.57□□□□□ -0.88
CRNDE-207ENST00000559598 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
CRNDE-207ENST00000559598 MTUS2Q5JR59 1369 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 ADH1AP07327 375 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 SCTRP47872 440 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 C6orf118Q5T5N4 469 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 PLPP7Q8NBV4 271 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 EIF2AK4Q9P2K8 1649 aaKnown RBP9.56□□□□□ -0.88
CRNDE-207ENST00000559598 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
CRNDE-207ENST00000559598 SCAF11Q99590 1463 aaKnown RBP9.55□□□□□ -0.88
CRNDE-207ENST00000559598 KIF3BO15066 747 aa9.55□□□□□ -0.88
CRNDE-207ENST00000559598 BMP2P12643 396 aa9.55□□□□□ -0.88
CRNDE-207ENST00000559598 MAP7D1Q3KQU3 841 aa9.55□□□□□ -0.88
CRNDE-207ENST00000559598 AGBL1Q96MI9 1066 aa9.55□□□□□ -0.88
CRNDE-207ENST00000559598 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 ABCC3O15438 1527 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 SLIT1O75093 1534 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 CEP162Q5TB80 1403 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 ARHGEF5Q12774 1597 aa9.54□□□□□ -0.88
CRNDE-207ENST00000559598 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
CRNDE-207ENST00000559598 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 ROBO1Q9Y6N7 1651 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
CRNDE-207ENST00000559598 SKIP12755 728 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 GMPRP36959 345 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 RELBQ01201 579 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 KDF1Q8NAX2 398 aaPredicted RBP9.53□□□□□ -0.88
CRNDE-207ENST00000559598 UCN2Q96RP3 112 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
CRNDE-207ENST00000559598 KDM5AP29375 1690 aaKnown RBP9.52□□□□□ -0.89
CRNDE-207ENST00000559598 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 PTGIRP43119 386 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 VEGFBP49765 207 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 USP4Q13107 963 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 C14orf37Q86TY3 774 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
CRNDE-207ENST00000559598 OSBPL3Q9H4L5 887 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.89
CRNDE-207ENST00000559598 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
CRNDE-207ENST00000559598 SPINT1O43278 529 aa9.51□□□□□ -0.89
CRNDE-207ENST00000559598 CYP2U1Q7Z449 544 aa9.51□□□□□ -0.89
CRNDE-207ENST00000559598 SIRT1Q96EB6 747 aa9.51□□□□□ -0.89
CRNDE-207ENST00000559598 ZNF395Q9H8N7 513 aaPredicted RBP9.51□□□□□ -0.89
CRNDE-207ENST00000559598 CEP152O94986 1710 aa9.51□□□□□ -0.89
CRNDE-207ENST00000559598 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
CRNDE-207ENST00000559598 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
CRNDE-207ENST00000559598 ZNF644Q9H582 1327 aaPredicted RBP9.5□□□□□ -0.89
CRNDE-207ENST00000559598 PHLPP1O60346 1717 aa9.49□□□□□ -0.89
CRNDE-207ENST00000559598 TBC1D9Q6ZT07 1266 aa9.49□□□□□ -0.89
CRNDE-207ENST00000559598 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
CRNDE-207ENST00000559598 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
CRNDE-207ENST00000559598 NKTRP30414 1462 aaKnown RBP9.48□□□□□ -0.89
CRNDE-207ENST00000559598 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
CRNDE-207ENST00000559598 VSIG8P0DPA2 414 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 EML3Q32P44 896 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 INSM2Q96T92 566 aaPredicted RBP9.48□□□□□ -0.89
CRNDE-207ENST00000559598 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 MROH1Q8NDA8 1641 aa9.48□□□□□ -0.89
CRNDE-207ENST00000559598 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 ATP9BO43861 1147 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 GNRH1P01148 92 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 NCOA4Q13772 614 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
CRNDE-207ENST00000559598 EID1Q9Y6B2 187 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
CRNDE-207ENST00000559598 PRDM15P57071 1507 aaPredicted RBP9.46□□□□□ -0.89
CRNDE-207ENST00000559598 A0A1W2PRU2 124 aa9.46□□□□□ -0.9
CRNDE-207ENST00000559598 TSPY4P0CV99 314 aa9.46□□□□□ -0.9
CRNDE-207ENST00000559598 TSPY10P0CW01 314 aa9.46□□□□□ -0.9
CRNDE-207ENST00000559598 CTSOP43234 321 aaPredicted RBP9.46□□□□□ -0.9
CRNDE-207ENST00000559598 DEPDC4Q8N2C3 294 aa9.46□□□□□ -0.9
CRNDE-207ENST00000559598 JCADQ9P266 1359 aa9.46□□□□□ -0.9
CRNDE-207ENST00000559598 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 ARHGEF10LQ9HCE6 1279 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
CRNDE-207ENST00000559598 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
CRNDE-207ENST00000559598 PALM3A6NDB9 673 aaPredicted RBP9.44□□□□□ -0.9
CRNDE-207ENST00000559598 MEN1O00255 615 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 CLN3Q13286 438 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CRNDE-207ENST00000559598 TXNDC2Q86VQ3 553 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 DNMT3LQ9UJW3 386 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 NOD1Q9Y239 953 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 FGD6Q6ZV73 1430 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms