RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 RNF181Q9P0P0 153 aa14.62□□□□□ -0.07
SYNE2-221ENST00000556342 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
SYNE2-221ENST00000556342 ARFGEF1Q9Y6D6 1849 aa14.62□□□□□ -0.07
SYNE2-221ENST00000556342 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
SYNE2-221ENST00000556342 STK25O00506 426 aa14.61□□□□□ -0.07
SYNE2-221ENST00000556342 DNAJC10Q8IXB1 793 aa14.61□□□□□ -0.07
SYNE2-221ENST00000556342 SLC52A2Q9HAB3 445 aa14.61□□□□□ -0.07
SYNE2-221ENST00000556342 SOS1Q07889 1333 aaPredicted RBP14.61□□□□□ -0.07
SYNE2-221ENST00000556342 ZPR1O75312 459 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 FSTL1Q12841 308 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 AKAP4Q5JQC9 854 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 STK24Q9Y6E0 443 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 ADAMTS7Q9UKP4 1686 aa14.6□□□□□ -0.07
SYNE2-221ENST00000556342 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
SYNE2-221ENST00000556342 MRC1P22897 1456 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 CYP19A1P11511 503 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-221ENST00000556342 HTRA3P83110 453 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 NFIXQ14938 502 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 KLRG1Q96E93 195 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 LGR6Q9HBX8 967 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 WDR90Q96KV7 1748 aa14.58□□□□□ -0.08
SYNE2-221ENST00000556342 SCN11AQ9UI33 1791 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
SYNE2-221ENST00000556342 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 RRAGCQ9HB90 399 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 NARFQ9UHQ1 456 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 ZBTB1Q9Y2K1 713 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 COL15A1P39059 1388 aa14.57□□□□□ -0.08
SYNE2-221ENST00000556342 RASSF7Q02833 373 aa14.56□□□□□ -0.08
SYNE2-221ENST00000556342 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-221ENST00000556342 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
SYNE2-221ENST00000556342 ZC3H4Q9UPT8 1303 aaKnown RBP14.56□□□□□ -0.08
SYNE2-221ENST00000556342 JMYQ8N9B5 988 aa14.55□□□□□ -0.08
SYNE2-221ENST00000556342 BCL2L12Q9HB09 334 aa14.55□□□□□ -0.08
SYNE2-221ENST00000556342 SERPINB2P05120 415 aa14.54□□□□□ -0.08
SYNE2-221ENST00000556342 HMOX1P09601 288 aa14.54□□□□□ -0.08
SYNE2-221ENST00000556342 LMNB1P20700 586 aa14.54□□□□□ -0.08
SYNE2-221ENST00000556342 VSIG10Q8N0Z9 540 aa14.54□□□□□ -0.08
SYNE2-221ENST00000556342 SMC1BQ8NDV3 1235 aa14.54□□□□□ -0.08
SYNE2-221ENST00000556342 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
SYNE2-221ENST00000556342 MTHFSDQ2M296 383 aaKnown RBP14.53□□□□□ -0.08
SYNE2-221ENST00000556342 TTLL6Q8N841 843 aa14.53□□□□□ -0.08
SYNE2-221ENST00000556342 NRXN2Q9P2S2 1712 aa14.52□□□□□ -0.08
SYNE2-221ENST00000556342 CARMIL3Q8ND23 1372 aa14.52□□□□□ -0.08
SYNE2-221ENST00000556342 PRELPP51888 382 aa14.52□□□□□ -0.09
SYNE2-221ENST00000556342 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.09
SYNE2-221ENST00000556342 SBF1O95248 1867 aa14.52□□□□□ -0.09
SYNE2-221ENST00000556342 PCNTO95613 3336 aa14.51□□□□□ -0.09
SYNE2-221ENST00000556342 GLTPD2A6NH11 291 aa14.51□□□□□ -0.09
SYNE2-221ENST00000556342 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
SYNE2-221ENST00000556342 DPY19L2Q6NUT2 758 aa14.51□□□□□ -0.09
SYNE2-221ENST00000556342 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
SYNE2-221ENST00000556342 H0YIN7 160 aa14.5□□□□□ -0.09
SYNE2-221ENST00000556342 NFKBIEO00221 500 aa14.5□□□□□ -0.09
SYNE2-221ENST00000556342 VEGFAP15692 232 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-221ENST00000556342 COL13A1Q5TAT6 717 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-221ENST00000556342 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
SYNE2-221ENST00000556342 STARD3NLO95772 234 aa14.49□□□□□ -0.09
SYNE2-221ENST00000556342 EIF5P55010 431 aaKnown RBP14.49□□□□□ -0.09
SYNE2-221ENST00000556342 BICDL1Q6ZP65 573 aa14.49□□□□□ -0.09
SYNE2-221ENST00000556342 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
SYNE2-221ENST00000556342 TTC5Q8N0Z6 440 aa14.49□□□□□ -0.09
SYNE2-221ENST00000556342 KIF7Q2M1P5 1343 aa14.48□□□□□ -0.09
SYNE2-221ENST00000556342 DLEC1Q9Y238 1755 aa14.48□□□□□ -0.09
SYNE2-221ENST00000556342 A0A087WZG4 1122 aa14.48□□□□□ -0.09
SYNE2-221ENST00000556342 UBR2Q8IWV8 1755 aa14.47□□□□□ -0.09
SYNE2-221ENST00000556342 TBC1D9BQ66K14 1250 aa14.47□□□□□ -0.09
SYNE2-221ENST00000556342 ZNF496Q96IT1 587 aaPredicted RBP14.47□□□□□ -0.09
SYNE2-221ENST00000556342 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
SYNE2-221ENST00000556342 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
SYNE2-221ENST00000556342 CC2D1BQ5T0F9 858 aaKnown RBP14.46□□□□□ -0.09
SYNE2-221ENST00000556342 ZNF790Q6PG37 636 aa14.46□□□□□ -0.09
SYNE2-221ENST00000556342 ZNF622Q969S3 477 aaKnown RBP eCLIP14.46□□□□□ -0.09
SYNE2-221ENST00000556342 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
SYNE2-221ENST00000556342 BRIP1Q9BX63 1249 aa14.46□□□□□ -0.09
SYNE2-221ENST00000556342 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.46□□□□□ -0.09
SYNE2-221ENST00000556342 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
SYNE2-221ENST00000556342 BOLA1Q9Y3E2 137 aa14.46□□□□□ -0.09
SYNE2-221ENST00000556342 POTECB2RU33 542 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 C21orf2O43822 256 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 PDE6BP35913 854 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 TEFQ10587 303 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 TIAM2Q8IVF5 1701 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 IL17REQ8NFR9 667 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 GAS2L2Q8NHY3 880 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
SYNE2-221ENST00000556342 TBC1D2BQ9UPU7 963 aa14.45□□□□□ -0.1
SYNE2-221ENST00000556342 VIRMAQ69YN4 1812 aaKnown RBP14.44□□□□□ -0.1
SYNE2-221ENST00000556342 GNAT3A8MTJ3 354 aa14.44□□□□□ -0.1
SYNE2-221ENST00000556342 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-221ENST00000556342 PRR5LQ6MZQ0 368 aa14.44□□□□□ -0.1
SYNE2-221ENST00000556342 CCDC24Q8N4L8 307 aa14.44□□□□□ -0.1
SYNE2-221ENST00000556342 MFRPQ9BY79 579 aa14.44□□□□□ -0.1
SYNE2-221ENST00000556342 ZNF330Q9Y3S2 320 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-221ENST00000556342 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
SYNE2-221ENST00000556342 SCN7AQ01118 1682 aa14.43□□□□□ -0.1
SYNE2-221ENST00000556342 G3V3G9 751 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms