RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 FOXO3O43524 673 aa10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 MAP10Q9P2G4 905 aa10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 TRPC5Q9UL62 973 aaPredicted RBP10.48□□□□□ -0.73
SUPT16H-204ENST00000555943 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
SUPT16H-204ENST00000555943 IRF5Q13568 498 aa10.47□□□□□ -0.73
SUPT16H-204ENST00000555943 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
SUPT16H-204ENST00000555943 USP21Q9UK80 565 aa10.47□□□□□ -0.73
SUPT16H-204ENST00000555943 KIF7Q2M1P5 1343 aa10.47□□□□□ -0.73
SUPT16H-204ENST00000555943 C11orf95C9JLR9 678 aaPredicted RBP10.46□□□□□ -0.73
SUPT16H-204ENST00000555943 CCNYL3P0C7X3 344 aa10.46□□□□□ -0.73
SUPT16H-204ENST00000555943 PSME1Q06323 249 aa10.46□□□□□ -0.73
SUPT16H-204ENST00000555943 NUDT16Q96DE0 195 aaKnown RBP10.46□□□□□ -0.73
SUPT16H-204ENST00000555943 NUDT12Q9BQG2 462 aa10.46□□□□□ -0.73
SUPT16H-204ENST00000555943 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
SUPT16H-204ENST00000555943 ADGRB2O60241 1585 aa10.46□□□□□ -0.74
SUPT16H-204ENST00000555943 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.46□□□□□ -0.74
SUPT16H-204ENST00000555943 RGPD8O14715 1765 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 ANKARQ7Z5J8 1434 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 CCDC7Q96M83 1385 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 WASHC2AQ641Q2 1341 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 ITGBL1O95965 494 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 S1PR4O95977 384 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 CTHP32929 405 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 EVA1BQ9NVM1 165 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 ZNF330Q9Y3S2 320 aaPredicted RBP10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
SUPT16H-204ENST00000555943 ATRNO75882 1429 aa10.44□□□□□ -0.74
SUPT16H-204ENST00000555943 KCNC4Q03721 635 aa10.44□□□□□ -0.74
SUPT16H-204ENST00000555943 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
SUPT16H-204ENST00000555943 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
SUPT16H-204ENST00000555943 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
SUPT16H-204ENST00000555943 SBNO1A3KN83 1393 aa10.43□□□□□ -0.74
SUPT16H-204ENST00000555943 KCNH2Q12809 1159 aa10.43□□□□□ -0.74
SUPT16H-204ENST00000555943 KRT28Q7Z3Y7 464 aa10.43□□□□□ -0.74
SUPT16H-204ENST00000555943 CABP1Q9NZU7 370 aa10.43□□□□□ -0.74
SUPT16H-204ENST00000555943 TNS3Q68CZ2 1445 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 ARHGEF10O15013 1369 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 DDX10Q13206 875 aaKnown RBP10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 HDGFL2Q7Z4V5 671 aaPredicted RBP10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 NGDNQ8NEJ9 315 aaKnown RBP10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 SLC12A5Q9H2X9 1139 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 TERF2IPQ9NYB0 399 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 USP32Q8NFA0 1604 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 BCL9LQ86UU0 1499 aa10.42□□□□□ -0.74
SUPT16H-204ENST00000555943 NINLQ9Y2I6 1382 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 PRR36Q9H6K5 1346 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 POM121CA8CG34 1229 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 XPCQ01831 940 aaPredicted RBP10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 CCDC24Q8N4L8 307 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 PMFBP1Q8TBY8 1022 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 FKBPLQ9UIM3 349 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 SLIT2O94813 1529 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 NWD2Q9ULI1 1742 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 PPIP5K1Q6PFW1 1433 aa10.41□□□□□ -0.74
SUPT16H-204ENST00000555943 PTCRAQ6ISU1 281 aaPredicted RBP10.4□□□□□ -0.74
SUPT16H-204ENST00000555943 PNMA1Q8ND90 353 aa10.4□□□□□ -0.74
SUPT16H-204ENST00000555943 PANK3Q9H999 370 aa10.4□□□□□ -0.74
SUPT16H-204ENST00000555943 ITSN1Q15811 1721 aa10.4□□□□□ -0.74
SUPT16H-204ENST00000555943 CCDC125Q86Z20 511 aa10.39□□□□□ -0.75
SUPT16H-204ENST00000555943 UNC5CLQ8IV45 518 aa10.39□□□□□ -0.75
SUPT16H-204ENST00000555943 ABCA3Q99758 1704 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 ACEP12821 1306 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 ATP7BP35670 1465 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 EP400Q96L91 3159 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 VAC14Q08AM6 782 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 KNSTRNQ9Y448 316 aa10.38□□□□□ -0.75
SUPT16H-204ENST00000555943 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-204ENST00000555943 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
SUPT16H-204ENST00000555943 TRPM3Q9HCF6 1732 aaPredicted RBP10.37□□□□□ -0.75
SUPT16H-204ENST00000555943 ALS2Q96Q42 1657 aa10.37□□□□□ -0.75
SUPT16H-204ENST00000555943 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
SUPT16H-204ENST00000555943 ZC3H4Q9UPT8 1303 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-204ENST00000555943 PLCH1Q4KWH8 1693 aa10.36□□□□□ -0.75
SUPT16H-204ENST00000555943 KTN1Q86UP2 1357 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-204ENST00000555943 VPS72Q15906 364 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 CCDC82Q8N4S0 544 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 ARMC2Q8NEN0 867 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 ARID3AQ99856 593 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 A0A1W2PP64 1363 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 GLI3P10071 1580 aa10.35□□□□□ -0.75
SUPT16H-204ENST00000555943 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 FBXO45P0C2W1 286 aa10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 ADAMTS19Q8TE59 1207 aa10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-204ENST00000555943 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
SUPT16H-204ENST00000555943 NR1H3Q13133 447 aa10.33□□□□□ -0.76
SUPT16H-204ENST00000555943 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
SUPT16H-204ENST00000555943 GLMNQ92990 594 aa10.33□□□□□ -0.76
SUPT16H-204ENST00000555943 CPSF1Q10570 1443 aaKnown RBP10.33□□□□□ -0.76
SUPT16H-204ENST00000555943 ZBBXA8MT70 800 aa10.32□□□□□ -0.76
SUPT16H-204ENST00000555943 NBPF14Q5TI25 921 aa10.32□□□□□ -0.76
SUPT16H-204ENST00000555943 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms