RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 GUCY1B3Q02153 619 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 PDE4BQ07343 736 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 PICALMQ13492 652 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 JDP2Q8WYK2 163 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 VTI1AQ96AJ9 217 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 MBIPQ9NS73 344 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 CCDC181Q5TID7 509 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 NEFHP12036 1026 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 GSTO1P78417 241 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 TMEM266Q2M3C6 531 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 BTG4Q9NY30 223 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 CHPF2Q9P2E5 772 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 EIF5P55010 431 aaKnown RBP9.59□□□□□ -0.87
SYNE2-220ENST00000555612 HAND2P61296 217 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 CCDC144CPQ8IYA2 1237 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 KAT14Q9H8E8 782 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 COPS6Q7L5N1 327 aa9.59□□□□□ -0.87
SYNE2-220ENST00000555612 NF2P35240 595 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 DZIP3Q86Y13 1208 aaKnown RBP9.58□□□□□ -0.88
SYNE2-220ENST00000555612 DNAI2Q9GZS0 605 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 A2MP01023 1474 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 CRNKL1Q9BZJ0 848 aaKnown RBP9.58□□□□□ -0.88
SYNE2-220ENST00000555612 SAMM50Q9Y512 469 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 PTPRCP08575 1304 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 CA8P35219 290 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 UTP14AQ9BVJ6 771 aaKnown RBP9.58□□□□□ -0.88
SYNE2-220ENST00000555612 WDR7Q9Y4E6 1490 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
SYNE2-220ENST00000555612 TEX35Q5T0J7 233 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 RAB34Q9BZG1 259 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 POTEJP0CG39 1038 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 VSIG10Q8N0Z9 540 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 C8orf76Q96K31 380 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 STK32BQ9NY57 414 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 NSD2O96028 1365 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
SYNE2-220ENST00000555612 RAB11FIP4Q86YS3 637 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 PLCH2O75038 1416 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 CCP110O43303 1012 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 UQCRFS1P1P0C7P4 283 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 MPNDQ8N594 471 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 ECHDC1Q9NTX5 307 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 GNPATO15228 680 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 KCNA6P17658 529 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 CCT2P78371 535 aaKnown RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 NSFL1CQ9UNZ2 370 aaKnown RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 ANKRD36BQ8N2N9 1353 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 ANKRD62A6NC57 917 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 BAG4O95429 457 aaKnown RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 MFSD6Q6ZSS7 791 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 ZNF771Q7L3S4 317 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 FAM177A1Q8N128 213 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-220ENST00000555612 NYXQ9GZU5 481 aa9.57□□□□□ -0.88
SYNE2-220ENST00000555612 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 CYP7A1P22680 504 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 ZNF804AQ7Z570 1209 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 NUP62CLQ9H1M0 184 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 ERLIN2O94905 339 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 AKAP4Q5JQC9 854 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 ZC3H12CQ9C0D7 883 aaKnown RBP9.56□□□□□ -0.88
SYNE2-220ENST00000555612 SAMD9Q5K651 1589 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
SYNE2-220ENST00000555612 KIF5BP33176 963 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 ZNF518AQ6AHZ1 1483 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 LMOD1P29536 600 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-220ENST00000555612 MRE11P49959 708 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 EVI5LQ96CN4 794 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 TSG101Q99816 390 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 DISP3Q9P2K9 1392 aa9.56□□□□□ -0.88
SYNE2-220ENST00000555612 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-220ENST00000555612 ATP2B3Q16720 1220 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-220ENST00000555612 ERCC4Q92889 916 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-220ENST00000555612 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-220ENST00000555612 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 CCDC12Q8WUD4 166 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-220ENST00000555612 GJA3Q9Y6H8 435 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 INSRP06213 1382 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 TSHZ3Q63HK5 1081 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 FAM43AQ8N2R8 423 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 LARP6Q9BRS8 491 aaKnown RBP9.55□□□□□ -0.88
SYNE2-220ENST00000555612 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 PLS1Q14651 629 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 CAMK4Q16566 473 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 DRC1Q96MC2 740 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 TRIM27P14373 513 aa9.55□□□□□ -0.88
SYNE2-220ENST00000555612 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms