RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 RBM6P78332 1123 aaKnown RBP14.29□□□□□ -0.12
VDR-208ENST00000550325 ME3Q16798 604 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
VDR-208ENST00000550325 TET3O43151 1660 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
VDR-208ENST00000550325 BMS1Q14692 1282 aaKnown RBP14.29□□□□□ -0.12
VDR-208ENST00000550325 SYCP1Q15431 976 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 KIF24Q5T7B8 1368 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 SGSM2O43147 1006 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 FOXO3O43524 673 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 SYT10Q6XYQ8 523 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 ERO1AQ96HE7 468 aa14.29□□□□□ -0.12
VDR-208ENST00000550325 H3BQV1 296 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 GNL2Q13823 731 aaKnown RBP14.28□□□□□ -0.12
VDR-208ENST00000550325 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
VDR-208ENST00000550325 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 PUS7Q96PZ0 661 aaKnown RBP14.28□□□□□ -0.12
VDR-208ENST00000550325 HYPKQ9NX55 129 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 ARHGAP29Q52LW3 1261 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 TEX35Q5T0J7 233 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
VDR-208ENST00000550325 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 CAPN2P17655 700 aa14.28□□□□□ -0.12
VDR-208ENST00000550325 HSP90B1P14625 803 aaKnown RBP14.27□□□□□ -0.12
VDR-208ENST00000550325 ATP8B2P98198 1209 aa14.27□□□□□ -0.12
VDR-208ENST00000550325 PTH1RQ03431 593 aa14.27□□□□□ -0.12
VDR-208ENST00000550325 SNW1Q13573 536 aaKnown RBP14.27□□□□□ -0.12
VDR-208ENST00000550325 TTC14Q96N46 770 aa14.27□□□□□ -0.12
VDR-208ENST00000550325 PNPLA6Q8IY17 1366 aa14.27□□□□□ -0.12
VDR-208ENST00000550325 SMC2O95347 1197 aa14.27□□□□□ -0.13
VDR-208ENST00000550325 ABCC1P33527 1531 aa14.27□□□□□ -0.13
VDR-208ENST00000550325 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
VDR-208ENST00000550325 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
VDR-208ENST00000550325 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.13
VDR-208ENST00000550325 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.13
VDR-208ENST00000550325 LARP1Q6PKG0 1096 aaKnown RBP14.26□□□□□ -0.13
VDR-208ENST00000550325 MNS1Q8NEH6 495 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 MROH2AA6NES4 1674 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 CHL1O00533 1208 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 FLIIQ13045 1269 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 IDI1Q13907 227 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 C10orf67Q8IYJ2 551 aa14.26□□□□□ -0.13
VDR-208ENST00000550325 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
VDR-208ENST00000550325 LSG1Q9H089 658 aaKnown RBP14.26□□□□□ -0.13
VDR-208ENST00000550325 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
VDR-208ENST00000550325 C11orf57Q6ZUT1 292 aaPredicted RBP14.25□□□□□ -0.13
VDR-208ENST00000550325 PPP1R42Q7Z4L9 355 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
VDR-208ENST00000550325 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 TMCO3Q6UWJ1 677 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 CCDC34Q96HJ3 373 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 CLSTN2Q9H4D0 955 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 LEO1Q8WVC0 666 aaPredicted RBP14.25□□□□□ -0.13
VDR-208ENST00000550325 UBXN4Q92575 508 aa14.25□□□□□ -0.13
VDR-208ENST00000550325 ZFYVE16Q7Z3T8 1539 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 KRBA2Q6ZNG9 492 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 RUFY2Q8WXA3 655 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 ZNF446Q9NWS9 450 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 PDCP20941 246 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 SEC31AO94979 1220 aaKnown RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 CLCN6P51797 869 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
VDR-208ENST00000550325 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
VDR-208ENST00000550325 ARGLU1Q9NWB6 273 aaPredicted RBP14.23□□□□□ -0.13
VDR-208ENST00000550325 SSH2Q76I76 1423 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 NPHP3Q7Z494 1330 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 AOPEPQ8N6M6 819 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 YTHDC2Q9H6S0 1430 aaKnown RBP14.23□□□□□ -0.13
VDR-208ENST00000550325 ADGRB1O14514 1584 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 URI1O94763 535 aaPredicted RBP14.23□□□□□ -0.13
VDR-208ENST00000550325 DNAI1Q9UI46 699 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
VDR-208ENST00000550325 TMC6Q7Z403 805 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 RSPH14Q9UHP6 348 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 NRDCO43847 1150 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 USP32Q8NFA0 1604 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 GYS2P54840 703 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 CCDC73Q6ZRK6 1079 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 EPC1Q9H2F5 836 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 SALL3Q9BXA9 1300 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 GLI2P10070 1586 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 NPATQ14207 1427 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 BLOC1S2Q6QNY1 142 aa14.22□□□□□ -0.13
VDR-208ENST00000550325 FANCAO15360 1455 aa14.21□□□□□ -0.13
VDR-208ENST00000550325 NRXN1Q9ULB1 1477 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms