RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 RBM42Q9BTD8 480 aaKnown RBP30.55■■■□□ 2.48
TGFBR1-207ENST00000549766 GCKRQ14397 625 aa30.55■■■□□ 2.48
TGFBR1-207ENST00000549766 PPP1R42Q7Z4L9 355 aa30.55■■■□□ 2.48
TGFBR1-207ENST00000549766 STARD3NLO95772 234 aa30.54■■■□□ 2.48
TGFBR1-207ENST00000549766 NUP188Q5SRE5 1749 aa30.54■■■□□ 2.48
TGFBR1-207ENST00000549766 THSD7AQ9UPZ6 1657 aa30.54■■■□□ 2.48
TGFBR1-207ENST00000549766 TTLL7Q6ZT98 887 aa30.53■■■□□ 2.48
TGFBR1-207ENST00000549766 CYP19A1P11511 503 aaPredicted RBP30.51■■■□□ 2.47
TGFBR1-207ENST00000549766 TJP1Q07157 1748 aa30.51■■■□□ 2.47
TGFBR1-207ENST00000549766 PLEKHM2Q8IWE5 1019 aa30.5■■■□□ 2.47
TGFBR1-207ENST00000549766 ACSBG1Q96GR2 724 aa30.5■■■□□ 2.47
TGFBR1-207ENST00000549766 KAZALD1Q96I82 304 aa30.5■■■□□ 2.47
TGFBR1-207ENST00000549766 ZBTB47Q9UFB7 747 aaPredicted RBP30.5■■■□□ 2.47
TGFBR1-207ENST00000549766 EXOC6BQ9Y2D4 811 aa30.5■■■□□ 2.47
TGFBR1-207ENST00000549766 BMP2KLQ5H9B9 411 aa30.49■■■□□ 2.47
TGFBR1-207ENST00000549766 MEX3CQ5U5Q3 659 aaKnown RBP30.49■■■□□ 2.47
TGFBR1-207ENST00000549766 SRGAP3O43295 1099 aa30.49■■■□□ 2.47
TGFBR1-207ENST00000549766 SUCLG2Q96I99 432 aa30.49■■■□□ 2.47
TGFBR1-207ENST00000549766 SMARCA5O60264 1052 aaPredicted RBP30.48■■■□□ 2.47
TGFBR1-207ENST00000549766 COL15A1P39059 1388 aa30.48■■■□□ 2.47
TGFBR1-207ENST00000549766 CICQ96RK0 1608 aaPredicted RBP30.48■■■□□ 2.47
TGFBR1-207ENST00000549766 AFF2P51816 1311 aa30.47■■■□□ 2.47
TGFBR1-207ENST00000549766 C16orf71Q8IYS4 520 aaPredicted RBP30.46■■■□□ 2.47
TGFBR1-207ENST00000549766 ATRNO75882 1429 aa30.46■■■□□ 2.47
TGFBR1-207ENST00000549766 GJD4Q96KN9 370 aaPredicted RBP30.46■■■□□ 2.47
TGFBR1-207ENST00000549766 LRRCC1Q9C099 1032 aa30.46■■■□□ 2.47
TGFBR1-207ENST00000549766 KAT6BQ8WYB5 2073 aa30.45■■■□□ 2.47
TGFBR1-207ENST00000549766 AFDNP55196 1824 aaKnown RBP30.45■■■□□ 2.46
TGFBR1-207ENST00000549766 APBB1O00213 710 aa30.44■■■□□ 2.46
TGFBR1-207ENST00000549766 RAB11FIP3O75154 756 aa30.44■■■□□ 2.46
TGFBR1-207ENST00000549766 NOP58Q9Y2X3 529 aaKnown RBP30.44■■■□□ 2.46
TGFBR1-207ENST00000549766 ATP5J2-PTCD1G3V325 749 aa30.43■■■□□ 2.46
TGFBR1-207ENST00000549766 BICC1Q9H694 974 aaKnown RBP30.43■■■□□ 2.46
TGFBR1-207ENST00000549766 CASP7P55210 303 aa30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 OTUD7AQ8TE49 926 aaPredicted RBP30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 SALL3Q9BXA9 1300 aa30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 KCNQ2O43526 872 aa30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 ONECUT3O60422 494 aaPredicted RBP30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 SEC24BO95487 1268 aa30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 ZBTB3Q9H5J0 574 aa30.42■■■□□ 2.46
TGFBR1-207ENST00000549766 SURF6O75683 361 aaKnown RBP30.41■■■□□ 2.46
TGFBR1-207ENST00000549766 SMARCC1Q92922 1105 aaPredicted RBP30.41■■■□□ 2.46
TGFBR1-207ENST00000549766 OSBPL3Q9H4L5 887 aa30.41■■■□□ 2.46
TGFBR1-207ENST00000549766 ANP32AP39687 249 aaKnown RBP30.4■■■□□ 2.46
TGFBR1-207ENST00000549766 ZBTB1Q9Y2K1 713 aa30.4■■■□□ 2.46
TGFBR1-207ENST00000549766 PALLDQ8WX93 1383 aa30.4■■■□□ 2.46
TGFBR1-207ENST00000549766 LOC102724428A0A0B4J2F2 783 aa30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 SIK1P57059 783 aa30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 HSP90AB4PQ58FF6 505 aa30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 CCDC191Q8NCU4 936 aa30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 ISCA1Q9BUE6 129 aa30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 TRPC5Q9UL62 973 aaPredicted RBP30.39■■■□□ 2.46
TGFBR1-207ENST00000549766 A0A087WZG4 1122 aa30.39■■■□□ 2.45
TGFBR1-207ENST00000549766 H7C1W4 665 aa30.39■■■□□ 2.45
TGFBR1-207ENST00000549766 TTC22Q5TAA0 569 aa30.39■■■□□ 2.45
TGFBR1-207ENST00000549766 GSPT1P15170 499 aaKnown RBP30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 IL6STP40189 918 aaPredicted RBP30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 TCIRG1Q13488 830 aa30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 CWC25Q9NXE8 425 aaPredicted RBP30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 ZNF831Q5JPB2 1677 aa30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 MAP3K15Q6ZN16 1313 aa30.38■■■□□ 2.45
TGFBR1-207ENST00000549766 RREB1Q92766 1687 aa30.37■■■□□ 2.45
TGFBR1-207ENST00000549766 TRIM28Q13263 835 aaKnown RBP30.37■■■□□ 2.45
TGFBR1-207ENST00000549766 RABL6Q3YEC7 729 aaPredicted RBP30.37■■■□□ 2.45
TGFBR1-207ENST00000549766 EPHA10Q5JZY3 1008 aa30.37■■■□□ 2.45
TGFBR1-207ENST00000549766 KIF6Q6ZMV9 814 aa30.37■■■□□ 2.45
TGFBR1-207ENST00000549766 A0A0G2JS52 829 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 ATP6V1AP38606 617 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 MYT1Q01538 1121 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 UBE3BQ7Z3V4 1068 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 RHPN1Q8TCX5 695 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 KIF1BPQ96EK5 621 aa30.36■■■□□ 2.45
TGFBR1-207ENST00000549766 NPM2Q86SE8 214 aaKnown RBP30.35■■■□□ 2.45
TGFBR1-207ENST00000549766 PDE1AP54750 535 aa30.34■■■□□ 2.45
TGFBR1-207ENST00000549766 ITPK1Q13572 414 aa30.34■■■□□ 2.45
TGFBR1-207ENST00000549766 INTS5Q6P9B9 1019 aaKnown RBP30.34■■■□□ 2.45
TGFBR1-207ENST00000549766 ZNF330Q9Y3S2 320 aaPredicted RBP30.34■■■□□ 2.45
TGFBR1-207ENST00000549766 GIGYF2Q6Y7W6 1299 aaKnown RBP30.33■■■□□ 2.45
TGFBR1-207ENST00000549766 CCDC87Q9NVE4 849 aa30.33■■■□□ 2.45
TGFBR1-207ENST00000549766 EIF5P55010 431 aaKnown RBP30.32■■■□□ 2.44
TGFBR1-207ENST00000549766 STAP2Q9UGK3 403 aa30.32■■■□□ 2.44
TGFBR1-207ENST00000549766 NHSQ6T4R5 1651 aa30.32■■■□□ 2.44
TGFBR1-207ENST00000549766 JARID2Q92833 1246 aaPredicted RBP30.31■■■□□ 2.44
TGFBR1-207ENST00000549766 ERVV-1B6SEH8 477 aa30.3■■■□□ 2.44
TGFBR1-207ENST00000549766 CRKLP46109 303 aaKnown RBP30.3■■■□□ 2.44
TGFBR1-207ENST00000549766 PA2G4Q9UQ80 394 aaKnown RBP30.3■■■□□ 2.44
TGFBR1-207ENST00000549766 MX1P20591 662 aa30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 FOXO4P98177 505 aa30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 ERC1Q8IUD2 1116 aa30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 BCL11AQ9H165 835 aa30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 IL1RAPL2Q9NP60 686 aa30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 COL5A3P25940 1745 aaPredicted RBP30.29■■■□□ 2.44
TGFBR1-207ENST00000549766 RFX5P48382 616 aaPredicted RBP30.28■■■□□ 2.44
TGFBR1-207ENST00000549766 HLFQ16534 295 aa30.28■■■□□ 2.44
TGFBR1-207ENST00000549766 HSP90AB3PQ58FF7 597 aa30.28■■■□□ 2.44
TGFBR1-207ENST00000549766 IPO9Q96P70 1041 aaKnown RBP30.28■■■□□ 2.44
TGFBR1-207ENST00000549766 AOX1Q06278 1338 aa30.27■■■□□ 2.44
TGFBR1-207ENST00000549766 PTF1AQ7RTS3 328 aa30.27■■■□□ 2.44
TGFBR1-207ENST00000549766 QTRT2Q9H974 415 aaKnown RBP30.27■■■□□ 2.44
TGFBR1-207ENST00000549766 COPRSQ9NQ92 184 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms