RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 THRAP3Q9Y2W1 955 aaKnown RBP12.3□□□□□ -0.44
RAB5B-206ENST00000549505 BCL9O00512 1426 aa12.3□□□□□ -0.44
RAB5B-206ENST00000549505 GCKRQ14397 625 aa12.29□□□□□ -0.44
RAB5B-206ENST00000549505 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-206ENST00000549505 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-206ENST00000549505 SLIT2O94813 1529 aa12.29□□□□□ -0.44
RAB5B-206ENST00000549505 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
RAB5B-206ENST00000549505 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
RAB5B-206ENST00000549505 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
RAB5B-206ENST00000549505 TOM1L2Q6ZVM7 507 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 ANAPC15P60006 121 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
RAB5B-206ENST00000549505 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
RAB5B-206ENST00000549505 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 AK9Q5TCS8 1911 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 REC8O95072 547 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 RABEP1Q15276 862 aa12.28□□□□□ -0.44
RAB5B-206ENST00000549505 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
RAB5B-206ENST00000549505 ERC2O15083 957 aa12.27□□□□□ -0.44
RAB5B-206ENST00000549505 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.44
RAB5B-206ENST00000549505 ANKRD13DQ6ZTN6 518 aa12.27□□□□□ -0.44
RAB5B-206ENST00000549505 COPRSQ9NQ92 184 aa12.27□□□□□ -0.44
RAB5B-206ENST00000549505 H7C1W4 665 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 SRGAP3O43295 1099 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 XAGE3Q8WTP9 111 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 SUCLG2Q96I99 432 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 SPEF2Q9C093 1822 aa12.27□□□□□ -0.45
RAB5B-206ENST00000549505 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 NBPF10Q6P3W6 841 aaKnown RBP12.26□□□□□ -0.45
RAB5B-206ENST00000549505 NBPF15Q8N660 670 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 DOT1LQ8TEK3 1739 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 CHMLP26374 656 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 COPS6Q7L5N1 327 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 ESYT1Q9BSJ8 1104 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 KCNB2Q92953 911 aa12.26□□□□□ -0.45
RAB5B-206ENST00000549505 JCADQ9P266 1359 aa12.25□□□□□ -0.45
RAB5B-206ENST00000549505 ANXA1P04083 346 aa12.25□□□□□ -0.45
RAB5B-206ENST00000549505 NFKBIBQ15653 356 aa12.25□□□□□ -0.45
RAB5B-206ENST00000549505 LRP5O75197 1615 aa12.25□□□□□ -0.45
RAB5B-206ENST00000549505 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
RAB5B-206ENST00000549505 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
RAB5B-206ENST00000549505 C9orf78Q9NZ63 289 aaPredicted RBP12.24□□□□□ -0.45
RAB5B-206ENST00000549505 RIC3Q7Z5B4 369 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 GPR108Q9NPR9 543 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
RAB5B-206ENST00000549505 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
RAB5B-206ENST00000549505 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
RAB5B-206ENST00000549505 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
RAB5B-206ENST00000549505 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
RAB5B-206ENST00000549505 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
RAB5B-206ENST00000549505 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
RAB5B-206ENST00000549505 LAMB2P55268 1798 aa12.23□□□□□ -0.45
RAB5B-206ENST00000549505 CCDC191Q8NCU4 936 aa12.23□□□□□ -0.45
RAB5B-206ENST00000549505 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
RAB5B-206ENST00000549505 SASH1O94885 1247 aa12.22□□□□□ -0.45
RAB5B-206ENST00000549505 RGL2O15211 777 aa12.22□□□□□ -0.45
RAB5B-206ENST00000549505 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
RAB5B-206ENST00000549505 FOXO4P98177 505 aa12.22□□□□□ -0.45
RAB5B-206ENST00000549505 THSD7AQ9UPZ6 1657 aa12.21□□□□□ -0.45
RAB5B-206ENST00000549505 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
RAB5B-206ENST00000549505 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
RAB5B-206ENST00000549505 EVA1CP58658 441 aa12.21□□□□□ -0.46
RAB5B-206ENST00000549505 ECHDC1Q9NTX5 307 aa12.21□□□□□ -0.46
RAB5B-206ENST00000549505 RAD50Q92878 1312 aa12.21□□□□□ -0.46
RAB5B-206ENST00000549505 CIAO1O76071 339 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 MCM2P49736 904 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 CLASRPQ8N2M8 674 aaKnown RBP12.2□□□□□ -0.46
RAB5B-206ENST00000549505 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 SGSM2O43147 1006 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 PIGBQ92521 554 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 MYD88Q99836 296 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 ARAP2Q8WZ64 1704 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 HSPA4P34932 840 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
RAB5B-206ENST00000549505 EPHA10Q5JZY3 1008 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 UBE2Q2Q8WVN8 375 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
RAB5B-206ENST00000549505 GPATCH3Q96I76 525 aa12.19□□□□□ -0.46
RAB5B-206ENST00000549505 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
RAB5B-206ENST00000549505 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
RAB5B-206ENST00000549505 UNC5CLQ8IV45 518 aa12.19□□□□□ -0.46
RAB5B-206ENST00000549505 HIP1O00291 1037 aa12.18□□□□□ -0.46
RAB5B-206ENST00000549505 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
RAB5B-206ENST00000549505 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB5B-206ENST00000549505 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
RAB5B-206ENST00000549505 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
RAB5B-206ENST00000549505 MYL6BP14649 208 aa12.18□□□□□ -0.46
RAB5B-206ENST00000549505 CWC22Q9HCG8 908 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms