RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
VDR-204ENST00000547065 PI4K2BQ8TCG2 481 aa22.81■■□□□ 1.24
VDR-204ENST00000547065 DDX54Q8TDD1 881 aaKnown RBP22.81■■□□□ 1.24
VDR-204ENST00000547065 BICC1Q9H694 974 aaKnown RBP22.81■■□□□ 1.24
VDR-204ENST00000547065 CIZ1Q9ULV3 898 aaPredicted RBP22.81■■□□□ 1.24
VDR-204ENST00000547065 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
VDR-204ENST00000547065 CD2BP2O95400 341 aaKnown RBP22.79■■□□□ 1.24
VDR-204ENST00000547065 PLBD2Q8NHP8 589 aa22.79■■□□□ 1.24
VDR-204ENST00000547065 G3BP1Q13283 466 aaKnown RBP eCLIP22.78■■□□□ 1.24
VDR-204ENST00000547065 UNC5CLQ8IV45 518 aa22.78■■□□□ 1.24
VDR-204ENST00000547065 EPB41L2O43491 1005 aaKnown RBP22.77■■□□□ 1.24
VDR-204ENST00000547065 PA2G4Q9UQ80 394 aaKnown RBP22.77■■□□□ 1.24
VDR-204ENST00000547065 TUBGCP6Q96RT7 1819 aa22.77■■□□□ 1.24
VDR-204ENST00000547065 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
VDR-204ENST00000547065 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
VDR-204ENST00000547065 PIP4K2AP48426 406 aaPredicted RBP22.76■■□□□ 1.23
VDR-204ENST00000547065 CNTROBQ8N137 903 aa22.76■■□□□ 1.23
VDR-204ENST00000547065 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
VDR-204ENST00000547065 MCCP23508 829 aa22.76■■□□□ 1.23
VDR-204ENST00000547065 IFIT2P09913 472 aaKnown RBP22.75■■□□□ 1.23
VDR-204ENST00000547065 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
VDR-204ENST00000547065 COL15A1P39059 1388 aa22.75■■□□□ 1.23
VDR-204ENST00000547065 GLI3P10071 1580 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 NBPF26B4DH59 902 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 ST18O60284 1047 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 GSE1Q14687 1217 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 NBPF10Q6P3W6 841 aaKnown RBP22.74■■□□□ 1.23
VDR-204ENST00000547065 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
VDR-204ENST00000547065 ANAPC15P60006 121 aa22.73■■□□□ 1.23
VDR-204ENST00000547065 LAMB4A4D0S4 1761 aa22.72■■□□□ 1.23
VDR-204ENST00000547065 SASH1O94885 1247 aa22.72■■□□□ 1.23
VDR-204ENST00000547065 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
VDR-204ENST00000547065 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
VDR-204ENST00000547065 MCM4P33991 863 aa22.71■■□□□ 1.23
VDR-204ENST00000547065 EPHA10Q5JZY3 1008 aa22.71■■□□□ 1.23
VDR-204ENST00000547065 TNS2Q63HR2 1409 aa22.71■■□□□ 1.23
VDR-204ENST00000547065 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
VDR-204ENST00000547065 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
VDR-204ENST00000547065 MAP4K4O95819 1239 aaPredicted RBP22.71■■□□□ 1.23
VDR-204ENST00000547065 AACSQ86V21 672 aa22.71■■□□□ 1.23
VDR-204ENST00000547065 A0A087WZG4 1122 aa22.7■■□□□ 1.22
VDR-204ENST00000547065 A1BGP04217 495 aa22.7■■□□□ 1.22
VDR-204ENST00000547065 RABL6Q3YEC7 729 aaPredicted RBP22.7■■□□□ 1.22
VDR-204ENST00000547065 IL17RAQ96F46 866 aa22.7■■□□□ 1.22
VDR-204ENST00000547065 COPRSQ9NQ92 184 aa22.7■■□□□ 1.22
VDR-204ENST00000547065 UBR2Q8IWV8 1755 aa22.69■■□□□ 1.22
VDR-204ENST00000547065 ATP5J2-PTCD1G3V325 749 aa22.69■■□□□ 1.22
VDR-204ENST00000547065 IL27Q8NEV9 243 aa22.69■■□□□ 1.22
VDR-204ENST00000547065 UBE3BQ7Z3V4 1068 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 TEX13AQ9BXU3 409 aaPredicted RBP22.68■■□□□ 1.22
VDR-204ENST00000547065 SHANK3Q9BYB0 1731 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 SGSM2O43147 1006 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 CASP7P55210 303 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 TTLL7Q6ZT98 887 aa22.68■■□□□ 1.22
VDR-204ENST00000547065 H7C1W4 665 aa22.67■■□□□ 1.22
VDR-204ENST00000547065 RAB3GAP1Q15042 981 aa22.67■■□□□ 1.22
VDR-204ENST00000547065 VSIG10Q8N0Z9 540 aa22.67■■□□□ 1.22
VDR-204ENST00000547065 EAF2Q96CJ1 260 aaPredicted RBP22.67■■□□□ 1.22
VDR-204ENST00000547065 RFX5P48382 616 aaPredicted RBP22.66■■□□□ 1.22
VDR-204ENST00000547065 MCM2P49736 904 aa22.66■■□□□ 1.22
VDR-204ENST00000547065 SIL1Q9H173 461 aa22.66■■□□□ 1.22
VDR-204ENST00000547065 CWC25Q9NXE8 425 aaPredicted RBP22.66■■□□□ 1.22
VDR-204ENST00000547065 RUFY2Q8WXA3 655 aa22.66■■□□□ 1.22
VDR-204ENST00000547065 JARID2Q92833 1246 aaPredicted RBP22.66■■□□□ 1.22
VDR-204ENST00000547065 EVI5LQ96CN4 794 aa22.66■■□□□ 1.22
VDR-204ENST00000547065 FOXD4L1Q9NU39 408 aa22.66■■□□□ 1.22
VDR-204ENST00000547065 COL14A1Q05707 1796 aaKnown RBP22.65■■□□□ 1.22
VDR-204ENST00000547065 PIGBQ92521 554 aa22.65■■□□□ 1.22
VDR-204ENST00000547065 ARFGEF2Q9Y6D5 1785 aa22.65■■□□□ 1.22
VDR-204ENST00000547065 NEK4P51957 841 aa22.64■■□□□ 1.22
VDR-204ENST00000547065 PTPN12Q05209 780 aaKnown RBP22.64■■□□□ 1.22
VDR-204ENST00000547065 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.22
VDR-204ENST00000547065 CWC22Q9HCG8 908 aaKnown RBP22.64■■□□□ 1.22
VDR-204ENST00000547065 AHDC1Q5TGY3 1603 aaPredicted RBP22.64■■□□□ 1.21
VDR-204ENST00000547065 DISP2A7MBM2 1401 aa22.64■■□□□ 1.21
VDR-204ENST00000547065 HSPA4P34932 840 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 KIAA1211Q6ZU35 1233 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 TNPO1Q92973 898 aaKnown RBP22.63■■□□□ 1.21
VDR-204ENST00000547065 CCDC8Q9H0W5 538 aaPredicted RBP22.63■■□□□ 1.21
VDR-204ENST00000547065 DIAPH3Q9NSV4 1193 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 IL25Q9H293 177 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 PALD1Q9ULE6 856 aa22.63■■□□□ 1.21
VDR-204ENST00000547065 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
VDR-204ENST00000547065 DDX11L8A8MPP1 907 aa22.62■■□□□ 1.21
VDR-204ENST00000547065 GBP4Q96PP9 640 aa22.62■■□□□ 1.21
VDR-204ENST00000547065 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
VDR-204ENST00000547065 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.62■■□□□ 1.21
VDR-204ENST00000547065 HIP1O00291 1037 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 EXOC5O00471 708 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 FOXO4P98177 505 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 LSG1Q9H089 658 aaKnown RBP22.61■■□□□ 1.21
VDR-204ENST00000547065 ATG3Q9NT62 314 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 RAD50Q92878 1312 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 COL22A1Q8NFW1 1626 aaPredicted RBP22.61■■□□□ 1.21
VDR-204ENST00000547065 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
VDR-204ENST00000547065 CWC27Q6UX04 472 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms