RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SLC19A1P41440 591 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 CABLES1Q8TDN4 633 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 KNSTRNQ9Y448 316 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 KIAA0232Q92628 1395 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-211ENST00000546304 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-211ENST00000546304 FYB1O15117 783 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 FDX1P10109 184 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 MMP16P51512 607 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
PRKDC-211ENST00000546304 COG3Q96JB2 828 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 TBC1D2Q9BYX2 928 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 WNK3Q9BYP7 1800 aa8.64□□□□□ -1.03
PRKDC-211ENST00000546304 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
PRKDC-211ENST00000546304 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
PRKDC-211ENST00000546304 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-211ENST00000546304 DDX10Q13206 875 aaKnown RBP8.63□□□□□ -1.03
PRKDC-211ENST00000546304 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
PRKDC-211ENST00000546304 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
PRKDC-211ENST00000546304 SLIT2O94813 1529 aa8.63□□□□□ -1.03
PRKDC-211ENST00000546304 CDK12Q9NYV4 1490 aaPredicted RBP8.63□□□□□ -1.03
PRKDC-211ENST00000546304 RTL1A6NKG5 1358 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 DXOO77932 396 aaKnown RBP8.62□□□□□ -1.03
PRKDC-211ENST00000546304 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 GCP02774 474 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 PLA2G2CQ5R387 149 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
PRKDC-211ENST00000546304 LIAT1Q6ZQX7 453 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
PRKDC-211ENST00000546304 AATKQ6ZMQ8 1374 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 NDUFV2P19404 249 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 CC2D1BQ5T0F9 858 aaKnown RBP8.61□□□□□ -1.03
PRKDC-211ENST00000546304 SPRYD7Q5W111 196 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 PRDM11Q9NQV5 511 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
PRKDC-211ENST00000546304 COL5A2P05997 1499 aaPredicted RBP8.61□□□□□ -1.03
PRKDC-211ENST00000546304 BLMP54132 1417 aaPredicted RBP8.61□□□□□ -1.03
PRKDC-211ENST00000546304 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
PRKDC-211ENST00000546304 RPIAP49247 311 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
PRKDC-211ENST00000546304 LAPTM4AQ15012 233 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
PRKDC-211ENST00000546304 C8orf37Q96NL8 207 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 RGPD2P0DJD1 1756 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 FLT4P35916 1363 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 KIF24Q5T7B8 1368 aa8.6□□□□□ -1.03
PRKDC-211ENST00000546304 MAP3K19Q56UN5 1328 aa8.59□□□□□ -1.03
PRKDC-211ENST00000546304 SPTLC1O15269 473 aa8.59□□□□□ -1.03
PRKDC-211ENST00000546304 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
PRKDC-211ENST00000546304 MORC1Q86VD1 984 aa8.59□□□□□ -1.03
PRKDC-211ENST00000546304 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
PRKDC-211ENST00000546304 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
PRKDC-211ENST00000546304 BCL9LQ86UU0 1499 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 AFF2P51816 1311 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 RGPD1P0DJD0 1748 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 C6orf229H3BNL8 230 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 TNNT2P45379 298 aaPredicted RBP8.58□□□□□ -1.04
PRKDC-211ENST00000546304 CNGB1Q14028 1251 aaPredicted RBP8.58□□□□□ -1.04
PRKDC-211ENST00000546304 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
PRKDC-211ENST00000546304 CHRNA2Q15822 529 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 EP400Q96L91 3159 aa8.58□□□□□ -1.04
PRKDC-211ENST00000546304 COL3A1P02461 1466 aaPredicted RBP8.57□□□□□ -1.04
PRKDC-211ENST00000546304 GLI3P10071 1580 aa8.57□□□□□ -1.04
PRKDC-211ENST00000546304 ATRNO75882 1429 aa8.57□□□□□ -1.04
PRKDC-211ENST00000546304 JUNDP17535 347 aa8.57□□□□□ -1.04
PRKDC-211ENST00000546304 NGLY1Q96IV0 654 aa8.57□□□□□ -1.04
PRKDC-211ENST00000546304 EMILIN1Q9Y6C2 1016 aa8.57□□□□□ -1.04
PRKDC-211ENST00000546304 PARP4Q9UKK3 1724 aaKnown RBP8.57□□□□□ -1.04
PRKDC-211ENST00000546304 LRRC37A3O60309 1634 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 FAM83GA6ND36 823 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 GFRA3O60609 400 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 FBLN1P23142 703 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 HOXC9P31274 260 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 MTMR2Q13614 643 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 MYSM1Q5VVJ2 828 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 FNBP4Q8N3X1 1017 aaPredicted RBP8.56□□□□□ -1.04
PRKDC-211ENST00000546304 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 BTG4Q9NY30 223 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 THSD7AQ9UPZ6 1657 aa8.56□□□□□ -1.04
PRKDC-211ENST00000546304 CRB1P82279 1406 aa8.55□□□□□ -1.04
PRKDC-211ENST00000546304 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
PRKDC-211ENST00000546304 AMPHP49418 695 aa8.55□□□□□ -1.04
PRKDC-211ENST00000546304 ZNF697Q5TEC3 545 aa8.55□□□□□ -1.04
PRKDC-211ENST00000546304 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
PRKDC-211ENST00000546304 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
PRKDC-211ENST00000546304 INSRP06213 1382 aa8.55□□□□□ -1.04
PRKDC-211ENST00000546304 PPM1GO15355 546 aaPredicted RBP8.54□□□□□ -1.04
PRKDC-211ENST00000546304 CD2BP2O95400 341 aaKnown RBP8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PRR20EP86478 221 aa8.54□□□□□ -1.04
PRKDC-211ENST00000546304 PRR20CP86479 221 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms