RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 USP21Q9UK80 565 aa24.64■■□□□ 1.54
COPS7A-218ENST00000543939 GCKRQ14397 625 aa24.64■■□□□ 1.53
COPS7A-218ENST00000543939 PLEKHM2Q8IWE5 1019 aa24.64■■□□□ 1.53
COPS7A-218ENST00000543939 SLC4A9Q96Q91 983 aa24.64■■□□□ 1.53
COPS7A-218ENST00000543939 EXOC6BQ9Y2D4 811 aa24.64■■□□□ 1.53
COPS7A-218ENST00000543939 TJP1Q07157 1748 aa24.63■■□□□ 1.53
COPS7A-218ENST00000543939 SMARCA5O60264 1052 aaPredicted RBP24.63■■□□□ 1.53
COPS7A-218ENST00000543939 TTLL7Q6ZT98 887 aa24.63■■□□□ 1.53
COPS7A-218ENST00000543939 STARD3NLO95772 234 aa24.62■■□□□ 1.53
COPS7A-218ENST00000543939 ANP32AP39687 249 aaKnown RBP24.62■■□□□ 1.53
COPS7A-218ENST00000543939 BMP2KLQ5H9B9 411 aa24.62■■□□□ 1.53
COPS7A-218ENST00000543939 APBB1O00213 710 aa24.61■■□□□ 1.53
COPS7A-218ENST00000543939 SRGAP3O43295 1099 aa24.61■■□□□ 1.53
COPS7A-218ENST00000543939 C16orf71Q8IYS4 520 aaPredicted RBP24.61■■□□□ 1.53
COPS7A-218ENST00000543939 THSD7AQ9UPZ6 1657 aa24.6■■□□□ 1.53
COPS7A-218ENST00000543939 ACSBG1Q96GR2 724 aa24.6■■□□□ 1.53
COPS7A-218ENST00000543939 KAZALD1Q96I82 304 aa24.6■■□□□ 1.53
COPS7A-218ENST00000543939 SUCLG2Q96I99 432 aa24.6■■□□□ 1.53
COPS7A-218ENST00000543939 NPM2Q86SE8 214 aaKnown RBP24.59■■□□□ 1.53
COPS7A-218ENST00000543939 SEC24BO95487 1268 aa24.58■■□□□ 1.53
COPS7A-218ENST00000543939 CYP19A1P11511 503 aaPredicted RBP24.58■■□□□ 1.53
COPS7A-218ENST00000543939 LRRCC1Q9C099 1032 aa24.58■■□□□ 1.53
COPS7A-218ENST00000543939 MEX3CQ5U5Q3 659 aaKnown RBP24.58■■□□□ 1.52
COPS7A-218ENST00000543939 OTUD7AQ8TE49 926 aaPredicted RBP24.58■■□□□ 1.52
COPS7A-218ENST00000543939 RAB11FIP3O75154 756 aa24.57■■□□□ 1.52
COPS7A-218ENST00000543939 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
COPS7A-218ENST00000543939 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
COPS7A-218ENST00000543939 COL15A1P39059 1388 aa24.56■■□□□ 1.52
COPS7A-218ENST00000543939 SURF6O75683 361 aaKnown RBP24.55■■□□□ 1.52
COPS7A-218ENST00000543939 BICC1Q9H694 974 aaKnown RBP24.55■■□□□ 1.52
COPS7A-218ENST00000543939 ZBTB3Q9H5J0 574 aa24.55■■□□□ 1.52
COPS7A-218ENST00000543939 NOP58Q9Y2X3 529 aaKnown RBP24.55■■□□□ 1.52
COPS7A-218ENST00000543939 TTC22Q5TAA0 569 aa24.54■■□□□ 1.52
COPS7A-218ENST00000543939 AFF2P51816 1311 aa24.53■■□□□ 1.52
COPS7A-218ENST00000543939 SALL3Q9BXA9 1300 aa24.53■■□□□ 1.52
COPS7A-218ENST00000543939 A0A0G2JS52 829 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 GSPT1P15170 499 aaKnown RBP24.52■■□□□ 1.52
COPS7A-218ENST00000543939 HSP90AB4PQ58FF6 505 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 OSBPL3Q9H4L5 887 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 A0A087WZG4 1122 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 CASP7P55210 303 aa24.52■■□□□ 1.52
COPS7A-218ENST00000543939 KCNQ2O43526 872 aa24.51■■□□□ 1.51
COPS7A-218ENST00000543939 UBE3BQ7Z3V4 1068 aa24.51■■□□□ 1.51
COPS7A-218ENST00000543939 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
COPS7A-218ENST00000543939 CWC25Q9NXE8 425 aaPredicted RBP24.51■■□□□ 1.51
COPS7A-218ENST00000543939 ATRNO75882 1429 aa24.51■■□□□ 1.51
COPS7A-218ENST00000543939 RREB1Q92766 1687 aa24.51■■□□□ 1.51
COPS7A-218ENST00000543939 H7C1W4 665 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 EPHA10Q5JZY3 1008 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 KIF6Q6ZMV9 814 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 CCDC191Q8NCU4 936 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 RHPN1Q8TCX5 695 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-218ENST00000543939 IPO9Q96P70 1041 aaKnown RBP24.5■■□□□ 1.51
COPS7A-218ENST00000543939 ZBTB1Q9Y2K1 713 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 ZNF330Q9Y3S2 320 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-218ENST00000543939 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
COPS7A-218ENST00000543939 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 PDE1AP54750 535 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 SIK1P57059 783 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 MYT1Q01538 1121 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 KIF1BPQ96EK5 621 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 ISCA1Q9BUE6 129 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 MAP3K15Q6ZN16 1313 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 TCIRG1Q13488 830 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 JARID2Q92833 1246 aaPredicted RBP24.49■■□□□ 1.51
COPS7A-218ENST00000543939 TUBGCP6Q96RT7 1819 aa24.49■■□□□ 1.51
COPS7A-218ENST00000543939 RABL6Q3YEC7 729 aaPredicted RBP24.48■■□□□ 1.51
COPS7A-218ENST00000543939 MSH5O43196 834 aa24.47■■□□□ 1.51
COPS7A-218ENST00000543939 ATP6V1AP38606 617 aa24.47■■□□□ 1.51
COPS7A-218ENST00000543939 IL6STP40189 918 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-218ENST00000543939 ANKRD36CQ5JPF3 1778 aa24.47■■□□□ 1.51
COPS7A-218ENST00000543939 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
COPS7A-218ENST00000543939 IL1RAPL2Q9NP60 686 aa24.47■■□□□ 1.51
COPS7A-218ENST00000543939 STAP2Q9UGK3 403 aa24.47■■□□□ 1.51
COPS7A-218ENST00000543939 TRPC5Q9UL62 973 aaPredicted RBP24.47■■□□□ 1.51
COPS7A-218ENST00000543939 PA2G4Q9UQ80 394 aaKnown RBP24.47■■□□□ 1.51
COPS7A-218ENST00000543939 COL5A3P25940 1745 aaPredicted RBP24.46■■□□□ 1.51
COPS7A-218ENST00000543939 ONECUT3O60422 494 aaPredicted RBP24.46■■□□□ 1.51
COPS7A-218ENST00000543939 MX1P20591 662 aa24.46■■□□□ 1.51
COPS7A-218ENST00000543939 UPF2Q9HAU5 1272 aaKnown RBP24.46■■□□□ 1.51
COPS7A-218ENST00000543939 NHSQ6T4R5 1651 aa24.46■■□□□ 1.51
COPS7A-218ENST00000543939 NUP98P52948 1817 aa24.46■■□□□ 1.51
COPS7A-218ENST00000543939 MYH14Q7Z406 1995 aaKnown RBP24.45■■□□□ 1.51
COPS7A-218ENST00000543939 ITPK1Q13572 414 aa24.45■■□□□ 1.5
COPS7A-218ENST00000543939 INTS5Q6P9B9 1019 aaKnown RBP24.45■■□□□ 1.5
COPS7A-218ENST00000543939 GIGYF2Q6Y7W6 1299 aaKnown RBP24.45■■□□□ 1.5
COPS7A-218ENST00000543939 ERC1Q8IUD2 1116 aa24.44■■□□□ 1.5
COPS7A-218ENST00000543939 CCDC87Q9NVE4 849 aa24.44■■□□□ 1.5
COPS7A-218ENST00000543939 CDC45O75419 566 aa24.44■■□□□ 1.5
COPS7A-218ENST00000543939 OS9Q13438 667 aaPredicted RBP24.44■■□□□ 1.5
COPS7A-218ENST00000543939 TBC1D9Q6ZT07 1266 aa24.44■■□□□ 1.5
COPS7A-218ENST00000543939 BTAF1O14981 1849 aa24.44■■□□□ 1.5
COPS7A-218ENST00000543939 AOX1Q06278 1338 aa24.43■■□□□ 1.5
COPS7A-218ENST00000543939 CRKLP46109 303 aaKnown RBP24.43■■□□□ 1.5
COPS7A-218ENST00000543939 FOXO4P98177 505 aa24.43■■□□□ 1.5
COPS7A-218ENST00000543939 TBC1D32Q96NH3 1257 aa24.43■■□□□ 1.5
COPS7A-218ENST00000543939 SDSP20132 328 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms