RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 HAP1P54257 671 aaPredicted RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 CEBPZQ03701 1054 aaKnown RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 PRPF40BQ6NWY9 871 aaKnown RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 TDRD7Q8NHU6 1098 aaKnown RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 TCEANC2Q96MN5 208 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 ADCK5Q3MIX3 580 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 LOC102724159A0A0B4J2E5 919 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 CLCN6P51797 869 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 PWP2Q15269 919 aaKnown RBP14.94□□□□□ -0.02
SMG8-202ENST00000543872 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 KIF1BPQ96EK5 621 aa14.94□□□□□ -0.02
SMG8-202ENST00000543872 PTPRCP08575 1304 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 SALL3Q9BXA9 1300 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 SGSM2O43147 1006 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 TEX35Q5T0J7 233 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 SYT10Q6XYQ8 523 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 C10orf67Q8IYJ2 551 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 RSPH14Q9UHP6 348 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 ME3Q16798 604 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 ZCCHC17Q9NP64 241 aaKnown RBP14.93□□□□□ -0.02
SMG8-202ENST00000543872 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
SMG8-202ENST00000543872 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 PSEN1P49768 467 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 CCT4P50991 539 aaKnown RBP14.93□□□□□ -0.02
SMG8-202ENST00000543872 NYAP1Q6ZVC0 841 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 FAM53CQ9NYF3 392 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.93□□□□□ -0.02
SMG8-202ENST00000543872 STAG3Q9UJ98 1225 aa14.93□□□□□ -0.02
SMG8-202ENST00000543872 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 SURF6O75683 361 aaKnown RBP14.92□□□□□ -0.02
SMG8-202ENST00000543872 KRBA2Q6ZNG9 492 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 NME9Q86XW9 330 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 CCAR2Q8N163 923 aaKnown RBP14.92□□□□□ -0.02
SMG8-202ENST00000543872 PNMA6AP0CW24 399 aaPredicted RBP14.92□□□□□ -0.02
SMG8-202ENST00000543872 STK3Q13188 491 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 LSG1Q9H089 658 aaKnown RBP14.92□□□□□ -0.02
SMG8-202ENST00000543872 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
SMG8-202ENST00000543872 FHOD1Q9Y613 1164 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
SMG8-202ENST00000543872 SNW1Q13573 536 aaKnown RBP14.91□□□□□ -0.02
SMG8-202ENST00000543872 TSPYL1Q9H0U9 437 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 SSH2Q76I76 1423 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 MROH2AA6NES4 1674 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 PLA2G4AP47712 749 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 HOMER1Q86YM7 354 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 MMP14P50281 582 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 CNPY4Q8N129 248 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 YEATS2Q9ULM3 1422 aa14.91□□□□□ -0.02
SMG8-202ENST00000543872 ST5P78524 1137 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 C11orf57Q6ZUT1 292 aaPredicted RBP14.9□□□□□ -0.02
SMG8-202ENST00000543872 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 TRIM66O15016 1216 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 SEC31AO94979 1220 aaKnown RBP14.9□□□□□ -0.02
SMG8-202ENST00000543872 PTH1RQ03431 593 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 TMCO3Q6UWJ1 677 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
SMG8-202ENST00000543872 ERBB3P21860 1342 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 CHL1O00533 1208 aa14.9□□□□□ -0.02
SMG8-202ENST00000543872 ERCC4Q92889 916 aaPredicted RBP14.9□□□□□ -0.02
SMG8-202ENST00000543872 KIAA0232Q92628 1395 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 FOSBP53539 338 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 SLFNL1Q499Z3 407 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 ZSCAN31Q96LW9 406 aaPredicted RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 SCAND2PQ9GZW5 306 aaPredicted RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 SETBP1Q9Y6X0 1596 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 ABCC1P33527 1531 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 ST3GAL1Q11201 340 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 UBXN4Q92575 508 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 DDX11Q96FC9 970 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 NEMFO60524 1076 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 GNAI3P08754 354 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 CCZ1BP86790 482 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 CCZ1P86791 482 aaPredicted RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 LARP1Q6PKG0 1096 aaKnown RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 GEMIN8Q9NWZ8 242 aaKnown RBP14.89□□□□□ -0.03
SMG8-202ENST00000543872 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
SMG8-202ENST00000543872 H2AFXP16104 143 aaPredicted RBP14.88□□□□□ -0.03
SMG8-202ENST00000543872 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 NPHP3Q7Z494 1330 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 GYS2P54840 703 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 RNF20Q5VTR2 975 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 CCDC191Q8NCU4 936 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 SMARCE1Q969G3 411 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 PGBD1Q96JS3 809 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 RASSF4Q9H2L5 321 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 SH2B1Q9NRF2 756 aaPredicted RBP14.88□□□□□ -0.03
SMG8-202ENST00000543872 TSPYL4Q9UJ04 414 aa14.88□□□□□ -0.03
SMG8-202ENST00000543872 TPM4P67936 248 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 CCDC34Q96HJ3 373 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 EPC1Q9H2F5 836 aa14.87□□□□□ -0.03
SMG8-202ENST00000543872 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms