RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
THBS3-210ENST00000541576 NEXNQ0ZGT2 675 aa10.85□□□□□ -0.67
THBS3-210ENST00000541576 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
THBS3-210ENST00000541576 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
THBS3-210ENST00000541576 PLBD2Q8NHP8 589 aa10.84□□□□□ -0.67
THBS3-210ENST00000541576 GCC1Q96CN9 775 aa10.84□□□□□ -0.67
THBS3-210ENST00000541576 METTL22Q9BUU2 404 aaPredicted RBP10.84□□□□□ -0.67
THBS3-210ENST00000541576 PALLDQ8WX93 1383 aa10.84□□□□□ -0.67
THBS3-210ENST00000541576 CYP19A1P11511 503 aaPredicted RBP10.84□□□□□ -0.67
THBS3-210ENST00000541576 CWF19L2Q2TBE0 894 aaKnown RBP10.84□□□□□ -0.67
THBS3-210ENST00000541576 LRRFIP2Q9Y608 721 aaKnown RBP10.84□□□□□ -0.67
THBS3-210ENST00000541576 LOC102724428A0A0B4J2F2 783 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 HMMRO75330 724 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 SIK1P57059 783 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 C9orf78Q9NZ63 289 aaPredicted RBP10.83□□□□□ -0.68
THBS3-210ENST00000541576 NBPF7P0C2Y1 421 aaPredicted RBP10.83□□□□□ -0.68
THBS3-210ENST00000541576 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 MYD88Q99836 296 aa10.83□□□□□ -0.68
THBS3-210ENST00000541576 ZNF330Q9Y3S2 320 aaPredicted RBP10.83□□□□□ -0.68
THBS3-210ENST00000541576 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 PDE4AP27815 886 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 NUCB1Q02818 461 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 TJP1Q07157 1748 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 ZNF772Q68DY9 489 aaPredicted RBP10.82□□□□□ -0.68
THBS3-210ENST00000541576 ARFGEF2Q9Y6D5 1785 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 NEURL1BA8MQ27 555 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 DCTPP1Q9H773 170 aa10.82□□□□□ -0.68
THBS3-210ENST00000541576 HDAC5Q9UQL6 1122 aa10.81□□□□□ -0.68
THBS3-210ENST00000541576 ZBTB1Q9Y2K1 713 aa10.81□□□□□ -0.68
THBS3-210ENST00000541576 IBTKQ9P2D0 1353 aaPredicted RBP10.81□□□□□ -0.68
THBS3-210ENST00000541576 GRM8O00222 908 aa10.81□□□□□ -0.68
THBS3-210ENST00000541576 ZBTB3Q9H5J0 574 aa10.81□□□□□ -0.68
THBS3-210ENST00000541576 ATP8B2P98198 1209 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 GCKRQ14397 625 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 ANKRD45Q5TZF3 282 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 LNPKQ9C0E8 428 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 KIF6Q6ZMV9 814 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 PTF1AQ7RTS3 328 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 CHD1LQ86WJ1 897 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 BACH2Q9BYV9 841 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 NHSQ6T4R5 1651 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 PNMA6EA0A0J9YXQ4 647 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 ITPK1Q13572 414 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 UTYO14607 1347 aa10.8□□□□□ -0.68
THBS3-210ENST00000541576 IL6STP40189 918 aaPredicted RBP10.79□□□□□ -0.68
THBS3-210ENST00000541576 RBM6P78332 1123 aaKnown RBP10.79□□□□□ -0.68
THBS3-210ENST00000541576 NUP188Q5SRE5 1749 aa10.79□□□□□ -0.68
THBS3-210ENST00000541576 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
THBS3-210ENST00000541576 FBXO41Q8TF61 875 aa10.79□□□□□ -0.68
THBS3-210ENST00000541576 CCDC87Q9NVE4 849 aa10.79□□□□□ -0.68
THBS3-210ENST00000541576 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
THBS3-210ENST00000541576 BTAF1O14981 1849 aa10.79□□□□□ -0.68
THBS3-210ENST00000541576 PPP1R42Q7Z4L9 355 aa10.79□□□□□ -0.68
THBS3-210ENST00000541576 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
THBS3-210ENST00000541576 AFDNP55196 1824 aaKnown RBP10.78□□□□□ -0.68
THBS3-210ENST00000541576 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
THBS3-210ENST00000541576 MAP3K15Q6ZN16 1313 aa10.78□□□□□ -0.68
THBS3-210ENST00000541576 SBF2Q86WG5 1849 aa10.78□□□□□ -0.68
THBS3-210ENST00000541576 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
THBS3-210ENST00000541576 SSH3Q8TE77 659 aa10.78□□□□□ -0.68
THBS3-210ENST00000541576 ZNF831Q5JPB2 1677 aa10.77□□□□□ -0.68
THBS3-210ENST00000541576 SRGAP3O43295 1099 aa10.77□□□□□ -0.68
THBS3-210ENST00000541576 C8orf34Q49A92 452 aa10.77□□□□□ -0.68
THBS3-210ENST00000541576 SUCLG2Q96I99 432 aa10.77□□□□□ -0.68
THBS3-210ENST00000541576 A0A087WZG4 1122 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 FAM196AQ6ZSG2 479 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.69
THBS3-210ENST00000541576 APBB1O00213 710 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 EIF5P55010 431 aaKnown RBP10.77□□□□□ -0.69
THBS3-210ENST00000541576 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 MTX1Q13505 466 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 POLA2Q14181 598 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
THBS3-210ENST00000541576 BRWD3Q6RI45 1802 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 UBE3BQ7Z3V4 1068 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 DZIP3Q86Y13 1208 aaKnown RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 KAZALD1Q96I82 304 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 EXOC6BQ9Y2D4 811 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 MYH14Q7Z406 1995 aaKnown RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 EP400Q96L91 3159 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 SMARCA5O60264 1052 aaPredicted RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 C16orf71Q8IYS4 520 aaPredicted RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 JARID2Q92833 1246 aaPredicted RBP10.76□□□□□ -0.69
THBS3-210ENST00000541576 ISCA1Q9BUE6 129 aa10.76□□□□□ -0.69
THBS3-210ENST00000541576 COL5A3P25940 1745 aaPredicted RBP10.75□□□□□ -0.69
THBS3-210ENST00000541576 HSP90AB3PQ58FF7 597 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 LINC00116Q8NCU8 138 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
THBS3-210ENST00000541576 TBC1D2BQ9UPU7 963 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 RREB1Q92766 1687 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 KCNQ4P56696 695 aa10.75□□□□□ -0.69
THBS3-210ENST00000541576 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
THBS3-210ENST00000541576 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
THBS3-210ENST00000541576 ERVV-1B6SEH8 477 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms