RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 TIGD1Q96MW7 591 aa13.98□□□□□ -0.17
EIF3A-203ENST00000541549 ABCF2Q9UG63 623 aa13.98□□□□□ -0.17
EIF3A-203ENST00000541549 ANAPC15P60006 121 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 HAND2P61296 217 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 PLEKHM2Q8IWE5 1019 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 LRP2BPQ9P2M1 347 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 ORC3Q9UBD5 711 aaPredicted RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 NEFHP12036 1026 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
EIF3A-203ENST00000541549 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 USP16Q9Y5T5 823 aa13.97□□□□□ -0.17
EIF3A-203ENST00000541549 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
EIF3A-203ENST00000541549 DCTPP1Q9H773 170 aa13.96□□□□□ -0.17
EIF3A-203ENST00000541549 DBF4Q9UBU7 674 aaPredicted RBP13.96□□□□□ -0.17
EIF3A-203ENST00000541549 SHTN1A0MZ66 631 aa13.96□□□□□ -0.17
EIF3A-203ENST00000541549 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
EIF3A-203ENST00000541549 TYRO3Q06418 890 aa13.96□□□□□ -0.17
EIF3A-203ENST00000541549 MAP9Q49MG5 647 aa13.96□□□□□ -0.17
EIF3A-203ENST00000541549 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
EIF3A-203ENST00000541549 RALGAPBQ86X10 1494 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 GOLIM4O00461 696 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 KRT24Q2M2I5 525 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 METTL24Q5JXM2 366 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 NUP88Q99567 741 aaPredicted RBP13.96□□□□□ -0.18
EIF3A-203ENST00000541549 SNRKQ9NRH2 765 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 CEP131Q9UPN4 1083 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 CCDC171Q6TFL3 1326 aa13.96□□□□□ -0.18
EIF3A-203ENST00000541549 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 ZNF213O14771 459 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 SYCP1Q15431 976 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 CARD14Q9BXL6 1004 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 VAMP4O75379 141 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 MCM6Q14566 821 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
EIF3A-203ENST00000541549 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
EIF3A-203ENST00000541549 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
EIF3A-203ENST00000541549 SPA17Q15506 151 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
EIF3A-203ENST00000541549 GOLGA6L7A0A1B0GV03 622 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 CCDC144CPQ8IYA2 1237 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 C17orf53Q8N3J3 647 aaPredicted RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 NAPBQ9H115 298 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 A0A087WZG4 1122 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 CALRP27797 417 aaKnown RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 LUZP1Q86V48 1076 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 NOS1P29475 1434 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 UBASH3AP57075 661 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 ENOX2Q16206 610 aaKnown RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 AOPEPQ8N6M6 819 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 TAF4BQ92750 862 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 AK2P54819 239 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 MICU3Q86XE3 530 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 IPO4Q8TEX9 1081 aaKnown RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 ZSCAN16Q9H4T2 348 aaPredicted RBP13.94□□□□□ -0.18
EIF3A-203ENST00000541549 ARFGAP3Q9NP61 516 aa13.94□□□□□ -0.18
EIF3A-203ENST00000541549 LIG1P18858 919 aa13.93□□□□□ -0.18
EIF3A-203ENST00000541549 DDX46Q7L014 1031 aaKnown RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 CCDC150Q8NCX0 1101 aa13.93□□□□□ -0.18
EIF3A-203ENST00000541549 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
EIF3A-203ENST00000541549 SLU7O95391 586 aaKnown RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 SEPT11Q9NVA2 429 aaKnown RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 NSD2O96028 1365 aa13.93□□□□□ -0.18
EIF3A-203ENST00000541549 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
EIF3A-203ENST00000541549 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
EIF3A-203ENST00000541549 SYT1P21579 422 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 CCDC102BQ68D86 513 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
EIF3A-203ENST00000541549 ZNF397Q8NF99 534 aaPredicted RBP13.92□□□□□ -0.18
EIF3A-203ENST00000541549 DTNBO60941 627 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 POLR3AO14802 1390 aaPredicted RBP13.92□□□□□ -0.18
EIF3A-203ENST00000541549 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 CPA1P15085 419 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
EIF3A-203ENST00000541549 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
EIF3A-203ENST00000541549 IQGAP2Q13576 1575 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 PAFAH1B1P43034 410 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 UBE3BQ7Z3V4 1068 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 CCDC196A0A1B0GTZ2 297 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
EIF3A-203ENST00000541549 SYKP43405 635 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
EIF3A-203ENST00000541549 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms