RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TEX13AQ9BXU3 409 aaPredicted RBP30.64■■■□□ 2.5
TTC3-225ENST00000540756 ATP5J2-PTCD1G3V325 749 aa30.63■■■□□ 2.49
TTC3-225ENST00000540756 TJP1Q07157 1748 aa30.63■■■□□ 2.49
TTC3-225ENST00000540756 STARD3NLO95772 234 aa30.63■■■□□ 2.49
TTC3-225ENST00000540756 CYP19A1P11511 503 aaPredicted RBP30.63■■■□□ 2.49
TTC3-225ENST00000540756 NEXNQ0ZGT2 675 aa30.63■■■□□ 2.49
TTC3-225ENST00000540756 C8orf34Q49A92 452 aa30.63■■■□□ 2.49
TTC3-225ENST00000540756 ATRNO75882 1429 aa30.62■■■□□ 2.49
TTC3-225ENST00000540756 HMMRO75330 724 aa30.62■■■□□ 2.49
TTC3-225ENST00000540756 GRM8O00222 908 aa30.61■■■□□ 2.49
TTC3-225ENST00000540756 ZBTB3Q9H5J0 574 aa30.61■■■□□ 2.49
TTC3-225ENST00000540756 TRPC5Q9UL62 973 aaPredicted RBP30.61■■■□□ 2.49
TTC3-225ENST00000540756 NUP188Q5SRE5 1749 aa30.6■■■□□ 2.49
TTC3-225ENST00000540756 PPP1R42Q7Z4L9 355 aa30.6■■■□□ 2.49
TTC3-225ENST00000540756 JARID2Q92833 1246 aaPredicted RBP30.6■■■□□ 2.49
TTC3-225ENST00000540756 EXOC6BQ9Y2D4 811 aa30.6■■■□□ 2.49
TTC3-225ENST00000540756 EP400Q96L91 3159 aa30.6■■■□□ 2.49
TTC3-225ENST00000540756 AFDNP55196 1824 aaKnown RBP30.6■■■□□ 2.49
TTC3-225ENST00000540756 SMARCA5O60264 1052 aaPredicted RBP30.59■■■□□ 2.49
TTC3-225ENST00000540756 GCKRQ14397 625 aa30.59■■■□□ 2.49
TTC3-225ENST00000540756 FAM161AQ3B820 660 aa30.59■■■□□ 2.49
TTC3-225ENST00000540756 C16orf71Q8IYS4 520 aaPredicted RBP30.58■■■□□ 2.49
TTC3-225ENST00000540756 KAZALD1Q96I82 304 aa30.58■■■□□ 2.49
TTC3-225ENST00000540756 QTRT2Q9H974 415 aaKnown RBP30.58■■■□□ 2.49
TTC3-225ENST00000540756 SUCLG2Q96I99 432 aa30.57■■■□□ 2.49
TTC3-225ENST00000540756 ZBTB1Q9Y2K1 713 aa30.57■■■□□ 2.49
TTC3-225ENST00000540756 UTYO14607 1347 aa30.57■■■□□ 2.48
TTC3-225ENST00000540756 PALLDQ8WX93 1383 aa30.56■■■□□ 2.48
TTC3-225ENST00000540756 LOC102724428A0A0B4J2F2 783 aa30.56■■■□□ 2.48
TTC3-225ENST00000540756 SIK1P57059 783 aa30.56■■■□□ 2.48
TTC3-225ENST00000540756 SSH3Q8TE77 659 aa30.56■■■□□ 2.48
TTC3-225ENST00000540756 ATP6V1AP38606 617 aa30.56■■■□□ 2.48
TTC3-225ENST00000540756 SRGAP3O43295 1099 aa30.55■■■□□ 2.48
TTC3-225ENST00000540756 ONECUT3O60422 494 aaPredicted RBP30.54■■■□□ 2.48
TTC3-225ENST00000540756 ITPK1Q13572 414 aa30.54■■■□□ 2.48
TTC3-225ENST00000540756 SEPT12Q8IYM1 358 aa30.54■■■□□ 2.48
TTC3-225ENST00000540756 POLA2Q14181 598 aa30.54■■■□□ 2.48
TTC3-225ENST00000540756 ARXQ96QS3 562 aa30.54■■■□□ 2.48
TTC3-225ENST00000540756 OTUD7AQ8TE49 926 aaPredicted RBP30.53■■■□□ 2.48
TTC3-225ENST00000540756 BICC1Q9H694 974 aaKnown RBP30.52■■■□□ 2.48
TTC3-225ENST00000540756 KCNQ4P56696 695 aa30.51■■■□□ 2.47
TTC3-225ENST00000540756 EPHA10Q5JZY3 1008 aa30.51■■■□□ 2.47
TTC3-225ENST00000540756 UBE3BQ7Z3V4 1068 aa30.5■■■□□ 2.47
TTC3-225ENST00000540756 MYH14Q7Z406 1995 aaKnown RBP30.49■■■□□ 2.47
TTC3-225ENST00000540756 INTS5Q6P9B9 1019 aaKnown RBP30.49■■■□□ 2.47
TTC3-225ENST00000540756 A0A087WZG4 1122 aa30.49■■■□□ 2.47
TTC3-225ENST00000540756 IBTKQ9P2D0 1353 aaPredicted RBP30.48■■■□□ 2.47
TTC3-225ENST00000540756 RTL5Q5HYW3 569 aaPredicted RBP30.48■■■□□ 2.47
TTC3-225ENST00000540756 CRKLP46109 303 aaKnown RBP30.47■■■□□ 2.47
TTC3-225ENST00000540756 MTX1Q13505 466 aa30.47■■■□□ 2.47
TTC3-225ENST00000540756 PLEKHM2Q8IWE5 1019 aa30.47■■■□□ 2.47
TTC3-225ENST00000540756 SURF6O75683 361 aaKnown RBP30.47■■■□□ 2.47
TTC3-225ENST00000540756 HLFQ16534 295 aa30.47■■■□□ 2.47
TTC3-225ENST00000540756 KIF6Q6ZMV9 814 aa30.47■■■□□ 2.47
TTC3-225ENST00000540756 SMARCC1Q92922 1105 aaPredicted RBP30.47■■■□□ 2.47
TTC3-225ENST00000540756 BTAF1O14981 1849 aa30.47■■■□□ 2.47
TTC3-225ENST00000540756 CASP7P55210 303 aa30.46■■■□□ 2.47
TTC3-225ENST00000540756 ZBTB47Q9UFB7 747 aaPredicted RBP30.46■■■□□ 2.47
TTC3-225ENST00000540756 TBC1D2BQ9UPU7 963 aa30.45■■■□□ 2.46
TTC3-225ENST00000540756 MAP3K15Q6ZN16 1313 aa30.45■■■□□ 2.46
TTC3-225ENST00000540756 CCDC87Q9NVE4 849 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 CWC25Q9NXE8 425 aaPredicted RBP30.44■■■□□ 2.46
TTC3-225ENST00000540756 PA2G4Q9UQ80 394 aaKnown RBP30.44■■■□□ 2.46
TTC3-225ENST00000540756 NHSQ6T4R5 1651 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 SEC24BO95487 1268 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 IL6STP40189 918 aaPredicted RBP30.44■■■□□ 2.46
TTC3-225ENST00000540756 TCIRG1Q13488 830 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 LRRCC1Q9C099 1032 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 SBF2Q86WG5 1849 aa30.44■■■□□ 2.46
TTC3-225ENST00000540756 HDAC5Q9UQL6 1122 aa30.43■■■□□ 2.46
TTC3-225ENST00000540756 ISCA1Q9BUE6 129 aa30.42■■■□□ 2.46
TTC3-225ENST00000540756 H7C1W4 665 aa30.42■■■□□ 2.46
TTC3-225ENST00000540756 EIF5P55010 431 aaKnown RBP30.41■■■□□ 2.46
TTC3-225ENST00000540756 CICQ96RK0 1608 aaPredicted RBP30.41■■■□□ 2.46
TTC3-225ENST00000540756 CCDC191Q8NCU4 936 aa30.4■■■□□ 2.46
TTC3-225ENST00000540756 LINC00116Q8NCU8 138 aa30.4■■■□□ 2.46
TTC3-225ENST00000540756 IL1RAPL2Q9NP60 686 aa30.4■■■□□ 2.46
TTC3-225ENST00000540756 BRWD3Q6RI45 1802 aa30.4■■■□□ 2.46
TTC3-225ENST00000540756 COL5A3P25940 1745 aaPredicted RBP30.4■■■□□ 2.46
TTC3-225ENST00000540756 GIGYF2Q6Y7W6 1299 aaKnown RBP30.4■■■□□ 2.46
TTC3-225ENST00000540756 NPM2Q86SE8 214 aaKnown RBP30.4■■■□□ 2.46
TTC3-225ENST00000540756 DZIP3Q86Y13 1208 aaKnown RBP30.4■■■□□ 2.46
TTC3-225ENST00000540756 KLHDC4Q8TBB5 520 aa30.39■■■□□ 2.45
TTC3-225ENST00000540756 NUP98P52948 1817 aa30.38■■■□□ 2.45
TTC3-225ENST00000540756 RREB1Q92766 1687 aa30.38■■■□□ 2.45
TTC3-225ENST00000540756 GSPT1P15170 499 aaKnown RBP30.38■■■□□ 2.45
TTC3-225ENST00000540756 GPTP24298 496 aa30.38■■■□□ 2.45
TTC3-225ENST00000540756 NOP58Q9Y2X3 529 aaKnown RBP30.37■■■□□ 2.45
TTC3-225ENST00000540756 BMP2KLQ5H9B9 411 aa30.37■■■□□ 2.45
TTC3-225ENST00000540756 RHPN1Q8TCX5 695 aa30.37■■■□□ 2.45
TTC3-225ENST00000540756 TSHZ3Q63HK5 1081 aa30.36■■■□□ 2.45
TTC3-225ENST00000540756 RAB11FIP3O75154 756 aa30.35■■■□□ 2.45
TTC3-225ENST00000540756 FOXO4P98177 505 aa30.35■■■□□ 2.45
TTC3-225ENST00000540756 RABL6Q3YEC7 729 aaPredicted RBP30.35■■■□□ 2.45
TTC3-225ENST00000540756 SMIM5Q71RC9 77 aa30.35■■■□□ 2.45
TTC3-225ENST00000540756 ZNF831Q5JPB2 1677 aa30.34■■■□□ 2.45
TTC3-225ENST00000540756 COL15A1P39059 1388 aa30.34■■■□□ 2.45
TTC3-225ENST00000540756 SALL3Q9BXA9 1300 aa30.34■■■□□ 2.45
TTC3-225ENST00000540756 TRIM28Q13263 835 aaKnown RBP30.34■■■□□ 2.45
TTC3-225ENST00000540756 TTC22Q5TAA0 569 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms