RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 NEXNQ0ZGT2 675 aa12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
PABPC1P4-201ENST00000539977 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.33
PABPC1P4-201ENST00000539977 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.33
PABPC1P4-201ENST00000539977 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
PABPC1P4-201ENST00000539977 SMIM5Q71RC9 77 aa12.96□□□□□ -0.33
PABPC1P4-201ENST00000539977 PNMA6EA0A0J9YXQ4 647 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 APBB1O00213 710 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 ALDH1L1O75891 902 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 TRIM37O94972 964 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 RXRBP28702 533 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 RPAP2Q8IXW5 612 aaPredicted RBP12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 SMC5Q8IY18 1101 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
PABPC1P4-201ENST00000539977 GCKRQ14397 625 aa12.94□□□□□ -0.34
PABPC1P4-201ENST00000539977 GRM8O00222 908 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 HLFQ16534 295 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 KIF6Q6ZMV9 814 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 SUCLG2Q96I99 432 aa12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
PABPC1P4-201ENST00000539977 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 A0A087WZG4 1122 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 ATP8B2P98198 1209 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 UBE3BQ7Z3V4 1068 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
PABPC1P4-201ENST00000539977 GPTP24298 496 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 IL6STP40189 918 aaPredicted RBP12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 DCTPP1Q9H773 170 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 EXOC6BQ9Y2D4 811 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 SRGAP3O43295 1099 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 HMMRO75330 724 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 PDE4AP27815 886 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 NUCB1Q02818 461 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
PABPC1P4-201ENST00000539977 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
PABPC1P4-201ENST00000539977 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
PABPC1P4-201ENST00000539977 TJP1Q07157 1748 aa12.9□□□□□ -0.34
PABPC1P4-201ENST00000539977 LRRC4BQ9NT99 713 aa12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 CWC25Q9NXE8 425 aaPredicted RBP12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 UTYO14607 1347 aa12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
PABPC1P4-201ENST00000539977 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
PABPC1P4-201ENST00000539977 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
PABPC1P4-201ENST00000539977 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
PABPC1P4-201ENST00000539977 FAM177BA6PVY3 158 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 GNPATO15228 680 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 CASP7P55210 303 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 H7C1W4 665 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 SURF6O75683 361 aaKnown RBP12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 POLA2Q14181 598 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
PABPC1P4-201ENST00000539977 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 BTAF1O14981 1849 aa12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 PHF14O94880 888 aa12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 COL15A1P39059 1388 aa12.86□□□□□ -0.35
PABPC1P4-201ENST00000539977 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 BRWD3Q6RI45 1802 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 MTX1Q13505 466 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 PROM2Q8N271 834 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 SIL1Q9H173 461 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
PABPC1P4-201ENST00000539977 UBN2Q6ZU65 1347 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms