RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
PDXDC1-205ENST00000535621 NBPF7P0C2Y1 421 aaPredicted RBP26.17■■□□□ 1.78
PDXDC1-205ENST00000535621 KCNQ4P56696 695 aa26.16■■□□□ 1.78
PDXDC1-205ENST00000535621 RIC3Q7Z5B4 369 aa26.16■■□□□ 1.78
PDXDC1-205ENST00000535621 LINS1Q8NG48 757 aa26.16■■□□□ 1.78
PDXDC1-205ENST00000535621 ATP8B2P98198 1209 aa26.15■■□□□ 1.78
PDXDC1-205ENST00000535621 POTEAQ6S8J7 498 aa26.15■■□□□ 1.78
PDXDC1-205ENST00000535621 ANKRD13DQ6ZTN6 518 aa26.15■■□□□ 1.78
PDXDC1-205ENST00000535621 KRT27Q7Z3Y8 459 aa26.15■■□□□ 1.78
PDXDC1-205ENST00000535621 ARFGEF2Q9Y6D5 1785 aa26.15■■□□□ 1.78
PDXDC1-205ENST00000535621 LOC102724428A0A0B4J2F2 783 aa26.14■■□□□ 1.78
PDXDC1-205ENST00000535621 SIK1P57059 783 aa26.14■■□□□ 1.78
PDXDC1-205ENST00000535621 CWF19L2Q2TBE0 894 aaKnown RBP26.14■■□□□ 1.78
PDXDC1-205ENST00000535621 MYH14Q7Z406 1995 aaKnown RBP26.14■■□□□ 1.77
PDXDC1-205ENST00000535621 CYP19A1P11511 503 aaPredicted RBP26.14■■□□□ 1.77
PDXDC1-205ENST00000535621 ITPK1Q13572 414 aa26.14■■□□□ 1.77
PDXDC1-205ENST00000535621 PNMA6EA0A0J9YXQ4 647 aa26.13■■□□□ 1.77
PDXDC1-205ENST00000535621 ATP6V1AP38606 617 aa26.13■■□□□ 1.77
PDXDC1-205ENST00000535621 ZNF330Q9Y3S2 320 aaPredicted RBP26.13■■□□□ 1.77
PDXDC1-205ENST00000535621 TTLL7Q6ZT98 887 aa26.12■■□□□ 1.77
PDXDC1-205ENST00000535621 METTL22Q9BUU2 404 aaPredicted RBP26.12■■□□□ 1.77
PDXDC1-205ENST00000535621 IBTKQ9P2D0 1353 aaPredicted RBP26.12■■□□□ 1.77
PDXDC1-205ENST00000535621 IGKV5-2P06315 115 aa26.12■■□□□ 1.77
PDXDC1-205ENST00000535621 TEX13AQ9BXU3 409 aaPredicted RBP26.12■■□□□ 1.77
PDXDC1-205ENST00000535621 NUP188Q5SRE5 1749 aa26.11■■□□□ 1.77
PDXDC1-205ENST00000535621 STARD3NLO95772 234 aa26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 RXRBP28702 533 aa26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 C9orf78Q9NZ63 289 aaPredicted RBP26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 ZBTB1Q9Y2K1 713 aa26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 COL5A3P25940 1745 aaPredicted RBP26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 NEXNQ0ZGT2 675 aa26.1■■□□□ 1.77
PDXDC1-205ENST00000535621 PLBD2Q8NHP8 589 aa26.09■■□□□ 1.77
PDXDC1-205ENST00000535621 UTYO14607 1347 aa26.09■■□□□ 1.77
PDXDC1-205ENST00000535621 SMARCC1Q92922 1105 aaPredicted RBP26.09■■□□□ 1.77
PDXDC1-205ENST00000535621 CICQ96RK0 1608 aaPredicted RBP26.08■■□□□ 1.77
PDXDC1-205ENST00000535621 NEURL1BA8MQ27 555 aa26.08■■□□□ 1.77
PDXDC1-205ENST00000535621 GRM8O00222 908 aa26.08■■□□□ 1.77
PDXDC1-205ENST00000535621 SSH3Q8TE77 659 aa26.08■■□□□ 1.77
PDXDC1-205ENST00000535621 MYD88Q99836 296 aa26.08■■□□□ 1.77
PDXDC1-205ENST00000535621 AFDNP55196 1824 aaKnown RBP26.07■■□□□ 1.76
PDXDC1-205ENST00000535621 PPP1R42Q7Z4L9 355 aa26.07■■□□□ 1.76
PDXDC1-205ENST00000535621 LY75O60449 1722 aa26.07■■□□□ 1.76
PDXDC1-205ENST00000535621 ZBTB3Q9H5J0 574 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 TRIM37O94972 964 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 POLA2Q14181 598 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 GCKRQ14397 625 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 INTS5Q6P9B9 1019 aaKnown RBP26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 HDAC5Q9UQL6 1122 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 EXOC6BQ9Y2D4 811 aa26.05■■□□□ 1.76
PDXDC1-205ENST00000535621 ZNF831Q5JPB2 1677 aa26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 CRKLP46109 303 aaKnown RBP26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 FAM196AQ6ZSG2 479 aa26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 LINC00116Q8NCU8 138 aa26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 ZBTB47Q9UFB7 747 aaPredicted RBP26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 RREB1Q92766 1687 aa26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 MTX1Q13505 466 aa26.04■■□□□ 1.76
PDXDC1-205ENST00000535621 APBB1O00213 710 aa26.03■■□□□ 1.76
PDXDC1-205ENST00000535621 SRGAP3O43295 1099 aa26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 SMARCA5O60264 1052 aaPredicted RBP26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 ARXQ96QS3 562 aa26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 BCL11BQ9C0K0 894 aaPredicted RBP26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 TAF1LQ8IZX4 1826 aa26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
PDXDC1-205ENST00000535621 PLEKHM2Q8IWE5 1019 aa26.01■■□□□ 1.75
PDXDC1-205ENST00000535621 C16orf71Q8IYS4 520 aaPredicted RBP26.01■■□□□ 1.75
PDXDC1-205ENST00000535621 KAZALD1Q96I82 304 aa26.01■■□□□ 1.75
PDXDC1-205ENST00000535621 CCDC87Q9NVE4 849 aa26.01■■□□□ 1.75
PDXDC1-205ENST00000535621 SUCLG2Q96I99 432 aa26■■□□□ 1.75
PDXDC1-205ENST00000535621 BMP2KLQ5H9B9 411 aa26■■□□□ 1.75
PDXDC1-205ENST00000535621 SMIM5Q71RC9 77 aa26■■□□□ 1.75
PDXDC1-205ENST00000535621 LRRCC1Q9C099 1032 aa25.98■■□□□ 1.75
PDXDC1-205ENST00000535621 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
PDXDC1-205ENST00000535621 JARID2Q92833 1246 aaPredicted RBP25.98■■□□□ 1.75
PDXDC1-205ENST00000535621 OTUD7AQ8TE49 926 aaPredicted RBP25.97■■□□□ 1.75
PDXDC1-205ENST00000535621 TBC1D2BQ9UPU7 963 aa25.97■■□□□ 1.75
PDXDC1-205ENST00000535621 NUP98P52948 1817 aa25.97■■□□□ 1.75
PDXDC1-205ENST00000535621 SEC24BO95487 1268 aa25.97■■□□□ 1.75
PDXDC1-205ENST00000535621 BICC1Q9H694 974 aaKnown RBP25.97■■□□□ 1.75
PDXDC1-205ENST00000535621 ANP32AP39687 249 aaKnown RBP25.96■■□□□ 1.75
PDXDC1-205ENST00000535621 IL6STP40189 918 aaPredicted RBP25.96■■□□□ 1.75
PDXDC1-205ENST00000535621 BCL11AQ9H165 835 aa25.96■■□□□ 1.75
PDXDC1-205ENST00000535621 SURF6O75683 361 aaKnown RBP25.95■■□□□ 1.75
PDXDC1-205ENST00000535621 EIF5P55010 431 aaKnown RBP25.95■■□□□ 1.75
PDXDC1-205ENST00000535621 HLFQ16534 295 aa25.95■■□□□ 1.75
PDXDC1-205ENST00000535621 NPM2Q86SE8 214 aaKnown RBP25.95■■□□□ 1.75
PDXDC1-205ENST00000535621 RAB11FIP3O75154 756 aa25.94■■□□□ 1.74
PDXDC1-205ENST00000535621 KIF6Q6ZMV9 814 aa25.94■■□□□ 1.74
PDXDC1-205ENST00000535621 LRRC4BQ9NT99 713 aa25.94■■□□□ 1.74
PDXDC1-205ENST00000535621 COL15A1P39059 1388 aa25.93■■□□□ 1.74
PDXDC1-205ENST00000535621 MAP3K15Q6ZN16 1313 aa25.93■■□□□ 1.74
PDXDC1-205ENST00000535621 A0A087WZG4 1122 aa25.93■■□□□ 1.74
PDXDC1-205ENST00000535621 NOP58Q9Y2X3 529 aaKnown RBP25.93■■□□□ 1.74
PDXDC1-205ENST00000535621 UBE3BQ7Z3V4 1068 aa25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 AMIGO3Q86WK7 504 aa25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 DZIP3Q86Y13 1208 aaKnown RBP25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 ANKRD36CQ5JPF3 1778 aa25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 CASP7P55210 303 aa25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 CWC25Q9NXE8 425 aaPredicted RBP25.92■■□□□ 1.74
PDXDC1-205ENST00000535621 GSPT1P15170 499 aaKnown RBP25.91■■□□□ 1.74
PDXDC1-205ENST00000535621 EPHA10Q5JZY3 1008 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms