RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 PDCP20941 246 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 SF3A1Q15459 793 aaKnown RBP18.85■□□□□ 0.61
MCF2L-232ENST00000535094 GORABQ5T7V8 394 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 CAMSAP1Q5T5Y3 1602 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 SMAP1Q8IYB5 467 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-232ENST00000535094 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 UHRF1BP1LA0JNW5 1464 aa18.85■□□□□ 0.61
MCF2L-232ENST00000535094 PSMA5P28066 241 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-232ENST00000535094 FAM200AQ8TCP9 573 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 ZSCAN31Q96LW9 406 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-232ENST00000535094 EID1Q9Y6B2 187 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 ME3Q16798 604 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
MCF2L-232ENST00000535094 PRR36Q9H6K5 1346 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 A0A087WWV3 80 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
MCF2L-232ENST00000535094 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.61
MCF2L-232ENST00000535094 MTMR6Q9Y217 621 aa18.83■□□□□ 0.61
MCF2L-232ENST00000535094 TPM3P06753 285 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 SDF4Q9BRK5 362 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 METP08581 1390 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 RGS12O14924 1447 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 MYL6BP14649 208 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 KLHDC4Q8TBB5 520 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 ERCC4Q92889 916 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-232ENST00000535094 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.6
MCF2L-232ENST00000535094 ZNF330Q9Y3S2 320 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 NAA30Q147X3 362 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 ATP2B3Q16720 1220 aa18.82■□□□□ 0.6
MCF2L-232ENST00000535094 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
MCF2L-232ENST00000535094 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
MCF2L-232ENST00000535094 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-232ENST00000535094 INO80Q9ULG1 1556 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-232ENST00000535094 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
MCF2L-232ENST00000535094 CCDC73Q6ZRK6 1079 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
MCF2L-232ENST00000535094 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 ERICH4A6NGS2 130 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 KCNQ3O43525 872 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-232ENST00000535094 MAP3K2Q9Y2U5 619 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
MCF2L-232ENST00000535094 LSG1Q9H089 658 aaKnown RBP18.81■□□□□ 0.6
MCF2L-232ENST00000535094 NEUROD6Q96NK8 337 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 PTPRMP28827 1452 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 CDK11BP21127 795 aaKnown RBP18.8■□□□□ 0.6
MCF2L-232ENST00000535094 ME1P48163 572 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 CCT2P78371 535 aaKnown RBP18.8■□□□□ 0.6
MCF2L-232ENST00000535094 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 CBX8Q9HC52 389 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
MCF2L-232ENST00000535094 CGNQ9P2M7 1197 aaKnown RBP18.8■□□□□ 0.6
MCF2L-232ENST00000535094 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
MCF2L-232ENST00000535094 TPCN1Q9ULQ1 816 aa18.79■□□□□ 0.6
MCF2L-232ENST00000535094 STAP2Q9UGK3 403 aa18.79■□□□□ 0.6
MCF2L-232ENST00000535094 MROH1Q8NDA8 1641 aa18.79■□□□□ 0.6
MCF2L-232ENST00000535094 KINO60870 393 aaKnown RBP18.78■□□□□ 0.6
MCF2L-232ENST00000535094 SMC2O95347 1197 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 KIAA1524Q8TCG1 905 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 SSH3Q8TE77 659 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 ZBTB9Q96C00 473 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 SCAND2PQ9GZW5 306 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-232ENST00000535094 ZNF710Q8N1W2 664 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 DEPDC5O75140 1603 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 JAK2O60674 1132 aa18.78■□□□□ 0.6
MCF2L-232ENST00000535094 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-232ENST00000535094 ZC3H13Q5T200 1668 aaKnown RBP18.77■□□□□ 0.6
MCF2L-232ENST00000535094 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
MCF2L-232ENST00000535094 KIDINS220Q9ULH0 1771 aa18.77■□□□□ 0.59
MCF2L-232ENST00000535094 AP5Z1O43299 807 aa18.77■□□□□ 0.59
MCF2L-232ENST00000535094 FAM177A1Q8N128 213 aaPredicted RBP18.77■□□□□ 0.59
MCF2L-232ENST00000535094 PI4K2BQ8TCG2 481 aa18.77■□□□□ 0.59
MCF2L-232ENST00000535094 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 BRF1Q92994 677 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 BIN1O00499 593 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 NRDCO43847 1150 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 PTPN14Q15678 1187 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 RAB11FIP4Q86YS3 637 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 STK11IPQ8N1F8 1099 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 EVI5LQ96CN4 794 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 KCNF1Q9H3M0 494 aa18.76■□□□□ 0.59
MCF2L-232ENST00000535094 AMOTL2Q9Y2J4 779 aa18.75■□□□□ 0.59
MCF2L-232ENST00000535094 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
MCF2L-232ENST00000535094 RPAP1Q9BWH6 1393 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-232ENST00000535094 NEXMIFQ5QGS0 1516 aa18.75■□□□□ 0.59
MCF2L-232ENST00000535094 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
MCF2L-232ENST00000535094 NR1I2O75469 434 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms