RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 ZNF790Q6PG37 636 aa14.44□□□□□ -0.1
CTNND1-235ENST00000533189 MASTLQ96GX5 879 aa14.44□□□□□ -0.1
CTNND1-235ENST00000533189 BCORQ6W2J9 1755 aa14.44□□□□□ -0.1
CTNND1-235ENST00000533189 SIPA1L3O60292 1781 aaPredicted RBP14.43□□□□□ -0.1
CTNND1-235ENST00000533189 VEGFBP49765 207 aa14.43□□□□□ -0.1
CTNND1-235ENST00000533189 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
CTNND1-235ENST00000533189 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
CTNND1-235ENST00000533189 EAPPQ56P03 285 aaPredicted RBP14.43□□□□□ -0.1
CTNND1-235ENST00000533189 L3MBTL3Q96JM7 780 aaPredicted RBP14.43□□□□□ -0.1
CTNND1-235ENST00000533189 FMNL2Q96PY5 1086 aa14.43□□□□□ -0.1
CTNND1-235ENST00000533189 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
CTNND1-235ENST00000533189 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
CTNND1-235ENST00000533189 CAMTA2O94983 1202 aa14.42□□□□□ -0.1
CTNND1-235ENST00000533189 A1BGP04217 495 aa14.42□□□□□ -0.1
CTNND1-235ENST00000533189 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
CTNND1-235ENST00000533189 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
CTNND1-235ENST00000533189 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
CTNND1-235ENST00000533189 DZIP3Q86Y13 1208 aaKnown RBP14.41□□□□□ -0.1
CTNND1-235ENST00000533189 GAS2L2Q8NHY3 880 aa14.41□□□□□ -0.1
CTNND1-235ENST00000533189 HACL1Q9UJ83 578 aa14.41□□□□□ -0.1
CTNND1-235ENST00000533189 NPR1P16066 1061 aa14.4□□□□□ -0.1
CTNND1-235ENST00000533189 LBX1P52954 281 aa14.4□□□□□ -0.1
CTNND1-235ENST00000533189 NBPF5PQ86XG9 351 aaPredicted RBP14.4□□□□□ -0.1
CTNND1-235ENST00000533189 IL17REQ8NFR9 667 aa14.4□□□□□ -0.1
CTNND1-235ENST00000533189 WBP1LQ9NX94 342 aa14.4□□□□□ -0.1
CTNND1-235ENST00000533189 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
CTNND1-235ENST00000533189 ITGBL1O95965 494 aaPredicted RBP14.39□□□□□ -0.11
CTNND1-235ENST00000533189 EPHX2P34913 555 aa14.39□□□□□ -0.11
CTNND1-235ENST00000533189 FKBP4Q02790 459 aaKnown RBP eCLIP14.39□□□□□ -0.11
CTNND1-235ENST00000533189 ZNF277Q9NRM2 450 aaPredicted RBP14.39□□□□□ -0.11
CTNND1-235ENST00000533189 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
CTNND1-235ENST00000533189 DEFB115Q30KQ5 88 aa14.38□□□□□ -0.11
CTNND1-235ENST00000533189 PNMA8AQ86V59 439 aaPredicted RBP14.38□□□□□ -0.11
CTNND1-235ENST00000533189 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
CTNND1-235ENST00000533189 ZNF541Q9H0D2 1346 aa14.38□□□□□ -0.11
CTNND1-235ENST00000533189 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 RASSF10A6NK89 507 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
CTNND1-235ENST00000533189 CLEC4GQ6UXB4 293 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 CNTROBQ8N137 903 aa14.37□□□□□ -0.11
CTNND1-235ENST00000533189 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
CTNND1-235ENST00000533189 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
CTNND1-235ENST00000533189 ABT1Q9ULW3 272 aaKnown RBP14.36□□□□□ -0.11
CTNND1-235ENST00000533189 RNF123Q5XPI4 1314 aa14.36□□□□□ -0.11
CTNND1-235ENST00000533189 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
CTNND1-235ENST00000533189 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
CTNND1-235ENST00000533189 PIP4K2AP48426 406 aaPredicted RBP14.35□□□□□ -0.11
CTNND1-235ENST00000533189 MAP1SQ66K74 1059 aaPredicted RBP14.35□□□□□ -0.11
CTNND1-235ENST00000533189 TPTE2Q6XPS3 522 aa14.35□□□□□ -0.11
CTNND1-235ENST00000533189 ABHD8Q96I13 439 aa14.35□□□□□ -0.11
CTNND1-235ENST00000533189 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
CTNND1-235ENST00000533189 WDR33Q9C0J8 1336 aaKnown RBP14.35□□□□□ -0.11
CTNND1-235ENST00000533189 KLRG2A4D1S0 409 aaPredicted RBP14.34□□□□□ -0.11
CTNND1-235ENST00000533189 KCNQ3O43525 872 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 ALDH1B1P30837 517 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 GPC2Q8N158 579 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 SYNE4Q8N205 404 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 JDP2Q8WYK2 163 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 NIP7Q9Y221 180 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTNND1-235ENST00000533189 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
CTNND1-235ENST00000533189 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
CTNND1-235ENST00000533189 FAM177BA6PVY3 158 aa14.33□□□□□ -0.12
CTNND1-235ENST00000533189 FZD9O00144 591 aa14.33□□□□□ -0.12
CTNND1-235ENST00000533189 SLC34A2O95436 690 aa14.33□□□□□ -0.12
CTNND1-235ENST00000533189 GTF2E1P29083 439 aaPredicted RBP14.33□□□□□ -0.12
CTNND1-235ENST00000533189 FAM161AQ3B820 660 aa14.33□□□□□ -0.12
CTNND1-235ENST00000533189 OLFM4Q6UX06 510 aa14.33□□□□□ -0.12
CTNND1-235ENST00000533189 TRPM7Q96QT4 1865 aa14.32□□□□□ -0.12
CTNND1-235ENST00000533189 SNRPA1P09661 255 aaKnown RBP14.32□□□□□ -0.12
CTNND1-235ENST00000533189 LMOD1P29536 600 aaPredicted RBP14.32□□□□□ -0.12
CTNND1-235ENST00000533189 EIF6P56537 245 aaKnown RBP14.32□□□□□ -0.12
CTNND1-235ENST00000533189 PAXIP1Q6ZW49 1069 aaPredicted RBP14.32□□□□□ -0.12
CTNND1-235ENST00000533189 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
CTNND1-235ENST00000533189 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
CTNND1-235ENST00000533189 RGL2O15211 777 aa14.31□□□□□ -0.12
CTNND1-235ENST00000533189 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
CTNND1-235ENST00000533189 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.124e-6■□□□□ 11.2
CTNND1-235ENST00000533189 KIF7Q2M1P5 1343 aa14.31□□□□□ -0.12
CTNND1-235ENST00000533189 PRAMEF22A3QJZ6 481 aa14.3□□□□□ -0.12
CTNND1-235ENST00000533189 PER1O15534 1290 aaPredicted RBP14.3□□□□□ -0.12
CTNND1-235ENST00000533189 ECE1P42892 770 aa14.3□□□□□ -0.12
CTNND1-235ENST00000533189 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
CTNND1-235ENST00000533189 PSMD1Q99460 953 aa14.3□□□□□ -0.12
CTNND1-235ENST00000533189 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
CTNND1-235ENST00000533189 GRM1Q13255 1194 aa14.29□□□□□ -0.12
CTNND1-235ENST00000533189 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
CTNND1-235ENST00000533189 CAPNS2Q96L46 248 aa14.29□□□□□ -0.12
CTNND1-235ENST00000533189 THSD7BQ9C0I4 1608 aa14.29□□□□□ -0.12
CTNND1-235ENST00000533189 CCDC85CA6NKD9 419 aa14.28□□□□□ -0.12
CTNND1-235ENST00000533189 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
CTNND1-235ENST00000533189 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
CTNND1-235ENST00000533189 LTBP1Q14766 1721 aa14.27□□□□□ -0.12
CTNND1-235ENST00000533189 NBPF26B4DH59 902 aa14.27□□□□□ -0.13
CTNND1-235ENST00000533189 MLLT1Q03111 559 aaPredicted RBP14.27□□□□□ -0.13
CTNND1-235ENST00000533189 HLFQ16534 295 aa14.27□□□□□ -0.13
CTNND1-235ENST00000533189 NBPF10Q6P3W6 841 aaKnown RBP14.27□□□□□ -0.13
CTNND1-235ENST00000533189 LARGE2Q8N3Y3 721 aa14.27□□□□□ -0.13
CTNND1-235ENST00000533189 NBPF15Q8N660 670 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms