RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SSRP1Q08945 709 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 BAG4O95429 457 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 ACSBG1Q96GR2 724 aa18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
PCDHA3-201ENST00000522353 NEFHP12036 1026 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TSG101Q99816 390 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TRIM27P14373 513 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 TRAF1Q13077 416 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 CETN2P41208 172 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 WDR7Q9Y4E6 1490 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 POLD1P28340 1107 aa18.9■□□□□ 0.62
PCDHA3-201ENST00000522353 DUOX2Q9NRD8 1548 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 FERMT3Q86UX7 667 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC82Q8N4S0 544 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 NYXQ9GZU5 481 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 ATP10BO94823 1461 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 ZNF397Q8NF99 534 aaPredicted RBP18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 KAT14Q9H8E8 782 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 SNRKQ9NRH2 765 aa18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
PCDHA3-201ENST00000522353 PPIP5K1Q6PFW1 1433 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MAP3K11Q16584 847 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MFSD6Q6ZSS7 791 aa18.88■□□□□ 0.61
PCDHA3-201ENST00000522353 MCM4P33991 863 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 XAGE3Q8WTP9 111 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ZRSR2Q15696 482 aaKnown RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 PLEKHH1Q9ULM0 1364 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ZFYP08048 801 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 TPTE2Q6XPS3 522 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 LIMCH1Q9UPQ0 1083 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC178Q5BJE1 867 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
PCDHA3-201ENST00000522353 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 NIP7Q9Y221 180 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 TMEM67Q5HYA8 995 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 GOLGA6L10A6NI86 522 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 FKBP15Q5T1M5 1219 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 HSPA2P54652 639 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 TMEM87AQ8NBN3 555 aa18.86■□□□□ 0.61
PCDHA3-201ENST00000522353 EPB41L2O43491 1005 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 SEPT7Q16181 437 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC112Q8NEF3 446 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 TAF4BQ92750 862 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 UBA5Q9GZZ9 404 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ATP2B3Q16720 1220 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 ANXA1P04083 346 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
PCDHA3-201ENST00000522353 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CFAP100Q494V2 611 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 AXDND1Q5T1B0 1012 aaPredicted RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 PUS7Q96PZ0 661 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 THOC2Q8NI27 1593 aaKnown RBP18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 FLT4P35916 1363 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 H0YHG0 523 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 ERLIN1O75477 346 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 DISP3Q9P2K9 1392 aa18.84■□□□□ 0.61
PCDHA3-201ENST00000522353 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 SSR1P43307 286 aaKnown RBP18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.61
PCDHA3-201ENST00000522353 SLC39A6Q13433 755 aa18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 KSR2Q6VAB6 950 aa18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 CDCA7Q9BWT1 371 aaPredicted RBP18.83■□□□□ 0.6
PCDHA3-201ENST00000522353 NF2P35240 595 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 IL15P40933 162 aaPredicted RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ZNF804AQ7Z570 1209 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 CETN1Q12798 172 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 SKIDA1Q1XH10 827 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 KIAA1328Q86T90 577 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 CALML4Q96GE6 196 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ZC3H12CQ9C0D7 883 aaKnown RBP18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 ANO10Q9NW15 660 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 AMPD3Q01432 767 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
PCDHA3-201ENST00000522353 FILIP1Q7Z7B0 1213 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms